U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SFXN1 sideroflexin 1 [ Gallus gallus (chicken) ]

    Gene ID: 416221, updated on 3-Apr-2024

    Summary

    Symbol
    SFXN1provided by CGNC
    Full Name
    sideroflexin 1provided by CGNC
    Primary source
    CGNC:2371
    See related
    Ensembl:ENSGALG00010012149
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (9634295..9669465)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (9640109..9675288)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene msh homeobox 2 Neighboring gene uncharacterized LOC107054519 Neighboring gene uncharacterized LOC121106691 Neighboring gene dopamine receptor D1 Neighboring gene kinesin family member 20A Neighboring gene bromodomain containing 8 Neighboring gene NHP2 ribonucleoprotein

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277743.1NP_001264672.1  sideroflexin-1

      Status: VALIDATED

      Source sequence(s)
      AJ396734, CN235276, CV854486, DR410950
      UniProtKB/TrEMBL
      A0A8V0YLD0
      Related
      ENSGALP00010016918.1, ENSGALT00010029174.1
      Conserved Domains (1) summary
      pfam03820
      Location:10322
      Mtc; Tricarboxylate carrier

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9634295..9669465
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025154842.3XP_025010610.3  sideroflexin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YEI2
      Related
      ENSGALP00010016923.1, ENSGALT00010029181.1
    2. XM_046900347.1XP_046756303.1  sideroflexin-1 isoform X3

    3. XM_046900346.1XP_046756302.1  sideroflexin-1 isoform X2

    4. XM_040646893.2XP_040502827.1  sideroflexin-1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q3AED9, A0A8V0YEG8
      Related
      ENSGALP00010016891.1, ENSGALT00010029138.1
      Conserved Domains (1) summary
      TIGR00798
      Location:8258
      mtc; tricarboxylate carrier

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9640109..9675288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046926944.1XP_046782900.1  sideroflexin-1 isoform X1

    2. XM_046926946.1XP_046782902.1  sideroflexin-1 isoform X2

    3. XM_046926945.1XP_046782901.1  sideroflexin-1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q3AED9