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    LOC100231469 class I histocompatibility antigen, F10 alpha chain [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100231469, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100231469
    Gene description
    class I histocompatibility antigen, F10 alpha chain
    See related
    Ensembl:ENSTGUG00000017273 Ensembl:ENSTGUG00000026427 Ensembl:ENSTGUG00000028417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
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    Genomic context

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    See LOC100231469 in Genome Data Viewer
    Location:
    chromosome: 35
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 35 NC_054767.1 (2303799..2309209, complement)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Unplaced Scaffold NW_022611545.1 (305708..311835)

    Chromosome 35 - NC_054767.1Genomic Context describing neighboring genes Neighboring gene tubulin beta chain Neighboring gene flotillin 1 Neighboring gene uncharacterized LOC116807444 Neighboring gene zinc finger protein 135

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    class I histocompatibility antigen, F10 alpha chain
    Names
    MHC class I antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_054767.1 Reference bTaeGut1.4.pri Primary Assembly

      Range
      2303799..2309209 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032745568.2 → XP_032601459.2  class I histocompatibility antigen, F10 alpha chain isoform X1

      UniProtKB/TrEMBL
      A0A674GC37, A0A674GR02
      Conserved Domains (3) summary
      cd00096
      Location:205 → 212
      Ig; Ig strand A [structural motif]
      cl08246
      Location:27 → 200
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
      cl11960
      Location:204 → 289
      Ig; Immunoglobulin domain

    2. XM_030262513.3 → XP_030118373.3  class I histocompatibility antigen, F10 alpha chain isoform X3

      UniProtKB/TrEMBL
      A0A674H484
      Conserved Domains (3) summary
      cd00096
      Location:205 → 212
      Ig; Ig strand A [structural motif]
      cl08246
      Location:27 → 200
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
      cl11960
      Location:204 → 289
      Ig; Immunoglobulin domain

    3. XM_030262512.3 → XP_030118372.3  class I histocompatibility antigen, F10 alpha chain isoform X2

      UniProtKB/TrEMBL
      A0A674H484
      Conserved Domains (3) summary
      cd00096
      Location:208 → 215
      Ig; Ig strand A [structural motif]
      cl08246
      Location:30 → 203
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
      cl11960
      Location:207 → 292
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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