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    CG16985 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38323, updated on 10-May-2024

    Summary

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    Official Symbol
    CG16985provided by FlyBase
    Primary source
    FLYBASE:FBgn0035355
    Locus tag
    Dmel_CG16985
    See related
    AllianceGenome:FB:FBgn0035355
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE30174; Dmel\CG16985
    Summary
    Predicted to enable acyl-CoA hydrolase activity. Is expressed in adult head; adult heart; and organism. Orthologous to human ACOT13 (acyl-CoA thioesterase 13). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG16985 in Genome Data Viewer
    Location:
    62E7-62E7; 3-3 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2599297..2600242)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2599297..2600242)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene daughter of sevenless Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Peroxidasin Neighboring gene long non-coding RNA:CR45981

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Influence of diet on the proteome of Drosophila melanogaster as assessed by two-dimensional gel electrophoresis and capillary liquid chromatography-mass spectrometry: the hamburger effect revisited. Culwell TF, et al. J Biomol Tech, 2008 Sep. PMID 19137114, Free PMC Article
    2. Mitochondrial-Y chromosome epistasis in Drosophila melanogaster. Ågren JA, et al. Proc Biol Sci, 2020 Oct 28. PMID 33081607, Free PMC Article
    3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    4. SUMO-Enriched Proteome for Drosophila Innate Immune Response. Handu M, et al. G3 (Bethesda), 2015 Aug 18. PMID 26290570, Free PMC Article
    5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables fatty acyl-CoA hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables fatty acyl-CoA hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables fatty acyl-CoA hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16985-PA
    NP_647730.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      2599297..2600242
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139473.4 → NP_647730.1  uncharacterized protein Dmel_CG16985 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647730.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZZ6
      Related
      FBpp0072806
      Conserved Domains (1) summary
      cd03443
      Location:31 → 140
      PaaI_thioesterase; PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VZZ6 Q9VZZ6

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