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    LOC101172658 myosin-11 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101172658, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101172658
    Gene description
    myosin-11
    See related
    EnsemblRapid:ENSORLG00000000775
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 8 NC_019866.2 (1033098..1049236)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 8 NC_019866.1 (567674..584064)

    Chromosome 8 - NC_019866.2Genomic Context describing neighboring genes Neighboring gene gsg1-like Neighboring gene HOATZ cilia and flagella associated protein Neighboring gene nuclear distribution protein nudE homolog 1 Neighboring gene mpv17-like protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin-11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019866.2 Reference ASM223467v1 Primary Assembly

      Range
      1033098..1049236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023957259.1 → XP_023813027.1  myosin-11 isoform X2

      UniProtKB/TrEMBL
      A0A3P9LA95
      Related
      ENSORLP00000000963.3, ENSORLT00000000964.3
      Conserved Domains (3) summary
      cd01377
      Location:96 → 767
      MYSc_class_II; class II myosins, motor domain
      pfam02736
      Location:31 → 69
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:844 → 1924
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_023957258.1 → XP_023813026.1  myosin-11 isoform X1

      UniProtKB/TrEMBL
      A0A3P9LA95
      Conserved Domains (2) summary
      cd01377
      Location:21 → 527
      MYSc_class_II; class II myosins, motor domain
      cl25732
      Location:604 → 1684
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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