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    LOC107272406 alpha-amylase 1 [ Cephus cinctus (wheat stem sawfly) ]

    Gene ID: 107272406, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107272406
    Gene description
    alpha-amylase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cephus cinctus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Cephoidea; Cephidae; Cephus
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    Genomic context

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    See LOC107272406 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Ccin1 (GCF_000341935.1) Unplaced Scaffold NW_014333664.1 (1197195..1200408, complement)

    NW_014333664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107272513 Neighboring gene alpha-amylase 1 Neighboring gene alpha-amylase 4N Neighboring gene alpha-amylase 1 Neighboring gene serine-enriched protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_014333664 Unplaced Scaffold Reference Ccin1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-amylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cation binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-amylase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cephus cinctus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ccin1 Primary Assembly

    Genomic

    1. NW_014333664.1 Reference Ccin1 Primary Assembly

      Range
      1197195..1200408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025089750.1 → XP_024945518.1  alpha-amylase 1 isoform X4

      Conserved Domains (2) summary
      cd11317
      Location:27 → 398
      AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
      smart00632
      Location:404 → 488
      Aamy_C; Aamy_C domain

    2. XM_025089748.1 → XP_024945516.1  alpha-amylase 1 isoform X1

      Conserved Domains (2) summary
      cd11317
      Location:27 → 398
      AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
      smart00632
      Location:404 → 488
      Aamy_C; Aamy_C domain

    3. XM_025089749.1 → XP_024945517.1  alpha-amylase 1 isoform X3

      Conserved Domains (2) summary
      cd11317
      Location:27 → 398
      AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
      smart00632
      Location:404 → 488
      Aamy_C; Aamy_C domain

    4. XM_015749531.2 → XP_015605017.1  alpha-amylase 1 isoform X2

      Conserved Domains (3) summary
      cd11317
      Location:27 → 398
      AmyAc_bac_euk_AmyA; Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
      smart00632
      Location:404 → 488
      Aamy_C; Aamy_C domain
      COG0366
      Location:16 → 225
      AmyA; Glycosidase [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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