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    CAL1 Calnexin homolog [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4840594, updated on 25-Jan-2024

    Summary

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    Gene symbol
    CAL1
    Gene description
    Calnexin homolog
    Locus tag
    PICST_85362
    Gene type
    protein coding
    RNA name
    Calnexin homolog
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See CAL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Sequence:
    Chromosome: 7; NC_009047.1 (95946..97826, complement)

    Chromosome 7 - NC_009047.1Genomic Context describing neighboring genes Neighboring gene orotate phosphoribosyltransferase Neighboring gene conserved hypothetical protein Neighboring gene cell wall structure or biosynthesis Neighboring gene RNA polymerase II transcription factor B 73 kDa subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009047.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    Calnexin homolog
    XP_001386232.2
    • Calnexin homolog (CALX)
      go_function calcium ion binding

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009047.1 Reference assembly

      Range
      95946..97826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001386195.1 → XP_001386232.2  Calnexin homolog [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001386232.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A3LYN5
      Conserved Domains (1) summary
      pfam00262
      Location:37 → 409
      Calreticulin; Calreticulin family
    Nucleotide Protein
    Heading Accession and Version

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