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    LOC113812137 T-box transcription factor TBX6-like [ Penaeus vannamei (Pacific white shrimp) ]

    Gene ID: 113812137, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC113812137
    Gene description
    T-box transcription factor TBX6-like
    Locus tag
    C7M84_010204
    See related
    EnsemblRapid:LOC113812137
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Penaeus vannamei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM378908v1 (GCF_003789085.1) Unplaced Scaffold NW_020869725.1 (130316..134411, complement)

    NW_020869725.1Genomic Context describing neighboring genes Neighboring gene extensin-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020869725 Unplaced Scaffold Reference ASM378908v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-box transcription factor TBX6-like
    Names
    putative T-box transcription factor TBX6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Penaeus vannamei Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM378908v1 Primary Assembly

    Genomic

    1. NW_020869725.1 Reference ASM378908v1 Primary Assembly

      Range
      130316..134411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027363970.1 → XP_027219771.1  T-box transcription factor TBX6-like isoform X2

      UniProtKB/TrEMBL
      A0A423T4W0, A0A4Y5P8E2
      Related
      XP_027219771.1, XM_027363970.1
      Conserved Domains (1) summary
      pfam00907
      Location:89 → 268
      T-box

    2. XM_027363969.1 → XP_027219770.1  T-box transcription factor TBX6-like isoform X1

      UniProtKB/TrEMBL
      A0A423T4W0
      Related
      XP_027219770.1, XM_027363969.1
    Nucleotide Protein
    Heading Accession and Version

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