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    ctse cathepsin E [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145572, updated on 14-Oct-2022

    Summary

    Official Symbol
    ctseprovided by Xenbase
    Official Full Name
    cathepsin Eprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-947864
    See related
    Ensembl:ENSXETG00000005932
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    ce1; ce2; cate; ctse-a; ctse-b
    Orthologs
    NEW
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    Genomic context

    See ctse in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (73731562..73751116, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (65367814..65387352, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 (anion exchanger), member 9 Neighboring gene RAB7B, member RAS oncogene family Neighboring gene uncharacterized LOC116408686 Neighboring gene arginine vasopressin receptor 1B

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in antigen processing and presentation of exogenous peptide antigen via MHC class II IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within protein autoprocessing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cathepsin E
    NP_001120469.1
    XP_012811737.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126997.1NP_001120469.1  cathepsin E precursor

      See identical proteins and their annotated locations for NP_001120469.1

      Status: PROVISIONAL

      Source sequence(s)
      BC161297
      UniProtKB/TrEMBL
      B1H383
      Related
      ENSXETP00000013055.3, ENSXETT00000013055.4
      Conserved Domains (2) summary
      pfam07966
      Location:1742
      A1_Propeptide; A1 Propeptide
      cl11403
      Location:74386
      pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      73731562..73751116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012956283.2XP_012811737.1  cathepsin E isoform X1

      See identical proteins and their annotated locations for XP_012811737.1

      UniProtKB/TrEMBL
      B1H383
      Conserved Domains (2) summary
      pfam07966
      Location:1742
      A1_Propeptide; A1 Propeptide
      cl11403
      Location:74386
      pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases