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    LOC119589482 rho guanine nucleotide exchange factor 5-like [ Penaeus monodon (black tiger shrimp) ]

    Gene ID: 119589482, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC119589482
    Gene description
    rho guanine nucleotide exchange factor 5-like
    See related
    EnsemblRapid:LOC119589482
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Penaeus monodon
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC119589482 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current NSTDA_Pmon_1 (GCF_015228065.1) 25 NC_051410.1 (2537283..2635279, complement)

    Chromosome 25 - NC_051410.1Genomic Context describing neighboring genes Neighboring gene ankyrin-1-like Neighboring gene 34 kDa spicule matrix protein-like Neighboring gene serine-rich adhesin for platelets-like Neighboring gene formin-like protein 20 Neighboring gene protein FAM102A-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051410.1 Chromosome 25 Reference NSTDA_Pmon_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho guanine nucleotide exchange factor 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Penaeus monodon Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NSTDA_Pmon_1 Primary Assembly

    Genomic

    1. NC_051410.1 Reference NSTDA_Pmon_1 Primary Assembly

      Range
      2537283..2635279 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037938082.1 → XP_037794010.1  rho guanine nucleotide exchange factor 5-like

      Related
      XP_037794010.1, XM_037938082.1
      Conserved Domains (3) summary
      cd11793
      Location:1488 → 1542
      SH3_ephexin1_like; Src homology 3 domain of ephexin-1-like SH3 domain containing Rho guanine nucleotide exchange factors
      cd01221
      Location:1340 → 1475
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:1133 → 1317
      RhoGEF; RhoGEF domain
    Nucleotide Protein
    Heading Accession and Version

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