U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TOM1L1 target of myb1 like 1 membrane trafficking protein [ Motacilla alba alba ]

    Gene ID: 119709561, updated on 21-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TOM1L1
    Gene description
    target of myb1 like 1 membrane trafficking protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Motacilla alba alba (sub-species: alba)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Motacillidae; Motacilla
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TOM1L1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Motacilla_alba_V1.0_pri (GCF_015832195.1) 18 NC_052033.1 (7169260..7192736)

    Chromosome 18 - NC_052033.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM39-like Neighboring gene carbonic anhydrase 10 Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene syntaxin binding protein 4 Neighboring gene HLF transcription factor, PAR bZIP family member

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_052033.1 Chromosome 18 Reference Motacilla_alba_V1.0_pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    TOM1-like protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Motacilla alba alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Motacilla_alba_V1.0_pri Primary Assembly

    Genomic

    1. NC_052033.1 Reference Motacilla_alba_V1.0_pri Primary Assembly

      Range
      7169260..7192736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038157493.1 → XP_038013421.1  TOM1-like protein 1 isoform X3

      Conserved Domains (2) summary
      cd16997
      Location:84 → 220
      VHS_Tom1L1; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 1
      cd14237
      Location:268 → 359
      GAT_TM1L1; canonical GAT domain found in target of Myb-like protein 1 (Tom1L1)

    2. XM_038157491.1 → XP_038013419.1  TOM1-like protein 1 isoform X1

      Conserved Domains (2) summary
      cd16997
      Location:84 → 220
      VHS_Tom1L1; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 1
      cd14237
      Location:268 → 359
      GAT_TM1L1; canonical GAT domain found in target of Myb-like protein 1 (Tom1L1)

    3. XM_038157492.1 → XP_038013420.1  TOM1-like protein 1 isoform X2

      Conserved Domains (2) summary
      cd14237
      Location:252 → 343
      GAT_TM1L1; canonical GAT domain found in target of Myb-like protein 1 (Tom1L1)
      cl02544
      Location:103 → 204
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.