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    gpnmb glycoprotein nmb [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100124325, updated on 30-Sep-2021

    Summary

    Official Symbol
    gpnmbprovided by Xenbase
    Official Full Name
    glycoprotein nmbprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-983263
    See related
    EnsemblRapid:ENSXETG00000007393
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    nmb; hgfin
    Orthologs
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    Genomic context

    See gpnmb in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (40230408..40240415)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (34820540..34830514, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene nucleoporin 42 Neighboring gene kelch like family member 7 Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene insulin like growth factor 2 mRNA binding protein 3

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    transmembrane glycoprotein NMB
    Names
    glycoprotein (transmembrane) nmb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001131042.1NP_001124514.1  transmembrane glycoprotein NMB precursor

      See identical proteins and their annotated locations for NP_001124514.1

      Status: PROVISIONAL

      Source sequence(s)
      BC168052
      UniProtKB/TrEMBL
      B4F6X8
      Related
      ENSXETP00000016105.3, ENSXETT00000016105.5
      Conserved Domains (1) summary
      cd00146
      Location:258316
      PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      40230408..40240415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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