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    LOC122775301 endoribonuclease ZC3H12A [ Solea senegalensis (Senegalese sole) ]

    Gene ID: 122775301, updated on 22-Mar-2024

    Summary

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    Gene symbol
    LOC122775301
    Gene description
    endoribonuclease ZC3H12A
    Locus tag
    JOB18_031116
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solea senegalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: LG9
    Exon count:
    6
    Annotation release Status Assembly LG Location
    100 current IFAPA_SoseM_1 (GCF_019176455.1) LG9 NC_058029.1 (23627781..23635691)

    Linkage Group LG9 - NC_058029.1Genomic Context describing neighboring genes Neighboring gene colony stimulating factor 3 receptor Neighboring gene glutamate ionotropic receptor kainate type subunit 3 Neighboring gene centrosome-associated protein 350 Neighboring gene secreted protein CSS1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058029.1 Chromosome LG9 Reference IFAPA_SoseM_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 3'-UTR-mediated mRNA destabilization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear-transcribed mRNA catabolic process, RNase MRP-dependent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic ribonucleoprotein granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoribonuclease ZC3H12A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IFAPA_SoseM_1 Primary Assembly

    Genomic

    1. NC_058029.1 Reference IFAPA_SoseM_1 Primary Assembly

      Range
      23627781..23635691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044035156.1 → XP_043891091.1  endoribonuclease ZC3H12A

      Conserved Domains (1) summary
      cd18729
      Location:111 → 241
      PIN_Zc3h12-like; PRORP-like PIN domain of ribonuclease Zc3h12a and related proteins

    2. XM_044035155.1 → XP_043891090.1  endoribonuclease ZC3H12A

      Conserved Domains (1) summary
      cd18729
      Location:111 → 241
      PIN_Zc3h12-like; PRORP-like PIN domain of ribonuclease Zc3h12a and related proteins
    Nucleotide Protein
    Heading Accession and Version

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