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    CSTA cystatin A [ Bos taurus (cattle) ]

    Gene ID: 617114, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CSTAprovided by VGNC
    Official Full Name
    cystatin Aprovided by VGNC
    Primary source
    VGNC:VGNC:27779
    See related
    BGD:BT12755
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (66773102..66783922)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342118 Neighboring gene calcium sensing receptor Neighboring gene interferon-induced, double-stranded RNA-activated protein kinase-like Neighboring gene SRA stem-loop-interacting RNA-binding protein, mitochondrial-like Neighboring gene mitochondrial matrix import factor 23 Neighboring gene family with sequence similarity 162 member A Neighboring gene ribosomal protein S15a pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of bovine stefin A, a novel protein inhibitor of cysteine proteinases. Turk B, et al. FEBS Lett, 1995 Feb 27. PMID 7875311
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cystatin-A
    Names
    cystatin AS
    stefin A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001167824.1 → NP_001161296.1  cystatin-A

      See identical proteins and their annotated locations for NP_001161296.1

      Status: VALIDATED

      Source sequence(s)
      DY057818, DY099878, NKLS02000001
      UniProtKB/Swiss-Prot
      P80416
      UniProtKB/TrEMBL
      F1N608
      Conserved Domains (1) summary
      pfam00031
      Location:4 → 92
      Cystatin; Cystatin domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      66773102..66783922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P80416.1 GenPept UniProtKB/Swiss-Prot:P80416

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