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    SUMF2 sulfatase modifying factor 2 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 742768, updated on 6-Jun-2024

    Summary

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    Official Symbol
    SUMF2provided by VGNC
    Official Full Name
    sulfatase modifying factor 2provided by VGNC
    Primary source
    VGNC:VGNC:4526
    Locus tag
    CK820_G0044378
    See related
    Ensembl:ENSPTRG00000019207 Ensembl:ENSPTRG00000047861
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See SUMF2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (61856680..61873089)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (59497457..59513856)

    Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA22 Neighboring gene chaperonin containing TCP1 subunit 6A Neighboring gene small nucleolar RNA SNORA15 Neighboring gene phosphorylase kinase catalytic subunit gamma 1 Neighboring gene small nucleolar RNA U13 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sulfatase-modifying factor 2; inactive C-alpha-formylglycine-generating enzyme 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      61856680..61873089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001160187.8 → XP_001160187.5  inactive C-alpha-formylglycine-generating enzyme 2 isoform X7

      UniProtKB/TrEMBL
      A0A2I3SBA6, A0A2J8JTY2, A0A6D2XRC4, K7BBP4

    2. XM_054687562.2 → XP_054543537.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X3

      UniProtKB/TrEMBL
      A0A2I3SJI3

    3. XM_054687560.2 → XP_054543535.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X1

      UniProtKB/TrEMBL
      A0A2J8JU30, A0A6D2XH01, H2QUM0

    4. XM_054687566.2 → XP_054543541.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X8

      UniProtKB/TrEMBL
      A0A2J8JTZ8

    5. XM_054687564.2 → XP_054543539.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X5

      UniProtKB/TrEMBL
      A0A2I3SJI3

    6. XM_054687561.2 → XP_054543536.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X2

      UniProtKB/TrEMBL
      A0A2J8JU30, A0A6D2XH01, H2QUM0

    7. XM_001160010.8 → XP_001160010.5  inactive C-alpha-formylglycine-generating enzyme 2 isoform X9

      UniProtKB/TrEMBL
      A0A2I3TI78, A0A2J8JTZ0, A0A6D2WMP9, K7BI44

    8. XM_063814230.1 → XP_063670300.1  inactive C-alpha-formylglycine-generating enzyme 2 isoform X10

    9. XM_054687565.2 → XP_054543540.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X6

    10. XM_024357840.3 → XP_024213608.3  inactive C-alpha-formylglycine-generating enzyme 2 isoform X11

      UniProtKB/TrEMBL
      A0A2I3SDG2, A0A2J8JTZ3, A0A6D2WDX2, K7BS06

    11. XM_054687563.2 → XP_054543538.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8JTZ8

    12. XM_063814231.1 → XP_063670301.1  inactive C-alpha-formylglycine-generating enzyme 2 isoform X12

      UniProtKB/TrEMBL
      G2HHY4

    13. XM_063814232.1 → XP_063670302.1  inactive C-alpha-formylglycine-generating enzyme 2 isoform X12

      UniProtKB/TrEMBL
      G2HHY4
    Nucleotide Protein
    Heading Accession and Version

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