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    plbd2 phospholipase B domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100491964, updated on 8-Mar-2024

    Summary

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    Official Symbol
    plbd2provided by Xenbase
    Official Full Name
    phospholipase B domain containing 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-992746
    See related
    Ensembl:ENSXETG00000017657
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    p76
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (146217951..146234921, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (133757988..133774446, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene LIM homeobox 5 Neighboring gene serine dehydratase like Neighboring gene serine dehydratase Neighboring gene solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 Neighboring gene FIC domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phospholipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phospholipase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phospholipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative phospholipase B-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      146217951..146234921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002939193.5 → XP_002939239.1  putative phospholipase B-like 2

      UniProtKB/TrEMBL
      A0A6I8SEG6, A0A6I8SJ03
      Related
      ENSXETP00000092226.2, ENSXETT00000079127.2
      Conserved Domains (1) summary
      pfam04916
      Location:6 → 545
      Phospholip_B; Phospholipase B
    Nucleotide Protein Strain
    Heading Accession and Version

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