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    Tiki UPF0632 protein A-like [ Amphimedon queenslandica ]

    Gene ID: 100633175, updated on 7-Dec-2023

    Summary

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    Gene symbol
    Tiki
    Gene description
    UPF0632 protein A-like
    See related
    EnsemblRapid:GeneID_100633175
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Amphimedon queenslandica
    Lineage
    Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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    Genomic context

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    See Tiki in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546386.1 (12680..17190, complement)

    NW_003546386.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109582536 Neighboring gene uncharacterized LOC109582535 Neighboring gene U6 snRNA-associated Sm-like protein LSm4 Neighboring gene uncharacterized LOC109582530 Neighboring gene uncharacterized LOC100633431

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003546386.1 Unplaced Scaffold Reference v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tiki1 is required for head formation via Wnt cleavage-oxidation and inactivation. Zhang X, et al. Cell, 2012 Jun 22. PMID 22726442, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metalloprotease TIKI homolog
    Names
    Metalloprotease TIKI homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001279279.1 → NP_001266208.1  metalloprotease TIKI homolog precursor

      See identical proteins and their annotated locations for NP_001266208.1

      Status: PROVISIONAL

      Source sequence(s)
      JQ653423
      UniProtKB/Swiss-Prot
      I1FQB6, I6TUB5
      UniProtKB/TrEMBL
      A0A1X7UR20
      Related
      NP_001266208.1, NM_001279279.1
      Conserved Domains (1) summary
      pfam01963
      Location:44 → 353
      TraB; TraB family

    RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0 Primary Assembly

    Genomic

    1. NW_003546386.1 Reference v1.0 Primary Assembly

      Range
      12680..17190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019997253.1 → XP_019852812.1  metalloprotease TIKI homolog isoform X1

      UniProtKB/TrEMBL
      A0A1X7UR20
      Related
      XP_019852812.1, XM_019997253.1
      Conserved Domains (1) summary
      pfam01963
      Location:41 → 350
      TraB; TraB family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    I1FQB6.2 GenPept UniProtKB/Swiss-Prot:I1FQB6

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