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    canx calnexin [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448161, updated on 5-Mar-2024

    Summary

    Official Symbol
    canxprovided by Xenbase
    Official Full Name
    calnexinprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5735140
    See related
    Ensembl:ENSXETG00000008408
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    cnx; clgn; clnx; canx-a; canx-b
    Orthologs
    NEW
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    Genomic context

    See canx in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (19882962..19902780, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (9493794..9513324, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene fatty acid hydroxylase domain containing 2 Neighboring gene CCR4-NOT transcription complex subunit 8 Neighboring gene leukotriene C4 synthase, gene 2 Neighboring gene protocadherin 12

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC69400

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in melanosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005668.1NP_001005668.1  calnexin precursor

      See identical proteins and their annotated locations for NP_001005668.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074698
      UniProtKB/TrEMBL
      A0A6I8SLR9, Q6DK68
      Related
      ENSXETP00000098505.1, ENSXETT00000098134.2
      Conserved Domains (1) summary
      pfam00262
      Location:85454
      Calreticulin; Calreticulin family

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      19882962..19902780 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)