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    Krt82 keratin 82 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 366991, updated on 30-Sep-2021

    Summary

    Official Symbol
    Krt82provided by RGD
    Official Full Name
    keratin 82provided by RGD
    Primary source
    RGD:1359276
    See related
    EnsemblRapid:ENSRNOG00000033403
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Kb22
    Expression
    Biased expression in Muscle (RPKM 2.3), Uterus (RPKM 0.3) and 2 other tissues See more
    Orthologs
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    Genomic context

    See Krt82 in Genome Data Viewer
    Location:
    7q36
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    108 current mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (132665506..132675362, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (143196282..143206138, complement)

    Chromosome 7 - NC_051342.1Genomic Context describing neighboring genes Neighboring gene keratin 85 Neighboring gene keratin 84 Neighboring gene type II keratin Kb15 Neighboring gene uncharacterized LOC108351555 Neighboring gene keratin 75

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in keratin filament ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    keratin, type II cuticular Hb2
    Names
    keratin 82, type II
    type II keratin Kb22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008803.1NP_001008803.1  keratin, type II cuticular Hb2

      See identical proteins and their annotated locations for NP_001008803.1

      Status: PROVISIONAL

      Source sequence(s)
      BK003979
      UniProtKB/TrEMBL
      A0A0G2QC61
      Related
      ENSRNOP00000035007.4, ENSRNOT00000029461.5
      Conserved Domains (3) summary
      pfam00038
      Location:95405
      Filament; Intermediate filament protein
      pfam16208
      Location:1891
      Keratin_2_head; Keratin type II head
      cl12057
      Location:302371
      Seryl_tRNA_N; Seryl-tRNA synthetase N-terminal domain

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRatBN7.2 Primary Assembly

    Genomic

    1. NC_051342.1 Reference mRatBN7.2 Primary Assembly

      Range
      132665506..132675362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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