U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100163134 dystrobrevin beta [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100163134, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100163134
    Gene description
    dystrobrevin beta
    See related
    APHIDBASE:ACYPI004240; EnsemblRapid:LOC100163134
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: A1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (106784340..106801061, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384614.1 (4001..20729)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene suppressor of fused homolog Neighboring gene probable E3 ubiquitin-protein ligase HECTD2 Neighboring gene uncharacterized LOC100572289 Neighboring gene tigger transposable element-derived protein 6-like Neighboring gene uncharacterized LOC100162984 Neighboring gene lipase member H

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dystrobrevin beta

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      106784340..106801061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001948373.5 → XP_001948408.2  dystrobrevin beta isoform X2

      UniProtKB/TrEMBL
      A0A8R2A738
      Related
      XP_001948408.2, XM_001948373.5
      Conserved Domains (3) summary
      cd02334
      Location:239 → 287
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:51 → 212
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:431 → 490
      DUF4472; Domain of unknown function (DUF4472)

    2. XM_016808260.2 → XP_016663749.1  dystrobrevin beta isoform X3

      UniProtKB/TrEMBL
      A0A8R2D6D5
      Related
      XP_016663749.1, XM_016808260.2
      Conserved Domains (3) summary
      cd02334
      Location:239 → 287
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:51 → 212
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:431 → 490
      DUF4472; Domain of unknown function (DUF4472)

    3. XM_016808258.2 → XP_016663747.1  dystrobrevin beta isoform X1

      UniProtKB/TrEMBL
      A0A8R2B9H3
      Related
      XP_016663747.1, XM_016808258.2
      Conserved Domains (3) summary
      cd02334
      Location:239 → 287
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:51 → 212
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:431 → 490
      DUF4472; Domain of unknown function (DUF4472)

    4. XM_016808259.2 → XP_016663748.1  dystrobrevin beta isoform X1

      UniProtKB/TrEMBL
      A0A8R2B9H3
      Related
      XP_016663748.1, XM_016808259.2
      Conserved Domains (3) summary
      cd02334
      Location:239 → 287
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:51 → 212
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:431 → 490
      DUF4472; Domain of unknown function (DUF4472)

    5. XM_008189602.3 → XP_008187824.1  dystrobrevin beta isoform X1

      UniProtKB/TrEMBL
      A0A8R2B9H3
      Related
      XP_008187824.1, XM_008189602.3
      Conserved Domains (3) summary
      cd02334
      Location:239 → 287
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:51 → 212
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:431 → 490
      DUF4472; Domain of unknown function (DUF4472)

    6. XM_008189603.3 → XP_008187825.1  dystrobrevin beta isoform X4

      UniProtKB/TrEMBL
      A0A8R2NRI9
      Related
      XP_008187825.1, XM_008189603.3
      Conserved Domains (3) summary
      cd02334
      Location:191 → 239
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:3 → 164
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:383 → 442
      DUF4472; Domain of unknown function (DUF4472)

    7. XM_029487983.1 → XP_029343843.1  dystrobrevin beta isoform X4

      UniProtKB/TrEMBL
      A0A8R2NRI9
      Related
      XP_029343843.1, XM_029487983.1
      Conserved Domains (3) summary
      cd02334
      Location:191 → 239
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16244
      Location:3 → 164
      EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
      pfam14739
      Location:383 → 442
      DUF4472; Domain of unknown function (DUF4472)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases