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    CCHa1 CCHamide-1 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 103315160, updated on 12-Apr-2024

    Summary

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    Gene symbol
    CCHa1
    Gene description
    CCHamide-1
    Locus tag
    TcasGA2_TC000813
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 4 NC_087397.1 (9084632..9089535, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG2 NC_007417.3 (6175707..6180616)

    Chromosome 4 - NC_087397.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103315161 Neighboring gene Peroxinectin-like Neighboring gene Sarcoplasmic calcium-binding protein 2 Neighboring gene leucine carboxyl methyltransferase 1 Neighboring gene uncharacterized LOC662035

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized LOC103315160
    Names
    AUGUSTUS-3.0.2_00813
    GLEAN_00813

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001293613.1 → NP_001280542.1  uncharacterized LOC103315160 precursor

      See identical proteins and their annotated locations for NP_001280542.1

      Status: PROVISIONAL

      Source sequence(s)
      JN033242
      UniProtKB/TrEMBL
      S4S925

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087397.1 Reference icTriCast1.1 Primary Assembly

      Range
      9084632..9089535 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008203119.3 → XP_008201341.1  uncharacterized LOC103315160 isoform X1

      UniProtKB/TrEMBL
      D6W8I1
    Nucleotide Protein Strain
    Heading Accession and Version

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