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    SAMD00019534_010110 hypothetical protein [ Acytostelium subglobosum LB1 ]

    Gene ID: 24516338, updated on 28-Dec-2023

    Summary

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    Gene symbol
    SAMD00019534_010110
    Gene description
    hypothetical protein
    Locus tag
    SAMD00019534_010110
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Acytostelium subglobosum LB1 (strain: LB1)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Acytostelium
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    Genomic context

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    Exon count:
    2

    NW_012236530.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012236530.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microfilament motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis to cAMP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle transport along actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microvillus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_012758432.1
    • ASU01018;
      gene_1004;
      homolog of Dictyostelium discoideum myoB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_012236530.1 Reference assembly

      Range
      595607..598936 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012902978.1 → XP_012758432.1  hypothetical protein SAMD00019534_010110 [Acytostelium subglobosum LB1]

      See identical proteins and their annotated locations for XP_012758432.1

      Status: PROVISIONAL

      Conserved Domains (4) summary
      smart00242
      Location:1 → 677
      MYSc; Myosin. Large ATPases
      smart00326
      Location:1028 → 1082
      SH3; Src homology 3 domains
      cd01378
      Location:8 → 664
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:704 → 879
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding
    Nucleotide Protein
    Heading Accession and Version

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