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    Smim45 small integral membrane protein 45 [ Mus musculus (house mouse) ]

    Gene ID: 76505, updated on 5-Jan-2022

    Summary

    Official Symbol
    Smim45provided by MGI
    Official Full Name
    small integral membrane protein 45provided by MGI
    Primary source
    MGI:MGI:1923755
    See related
    Ensembl:ENSMUSG00000068099
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500009C09Rik
    Summary
    Orthologous to human SMIM45 (small integral membrane protein 45). [provided by Alliance of Genome Resources, Nov 2021]
    Expression
    Biased expression in cerebellum adult (RPKM 39.0), frontal lobe adult (RPKM 31.9) and 6 other tissues See more
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    Genomic context

    See Smim45 in Genome Data Viewer
    Location:
    15; 15 E1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (82136673..82144947)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (82252472..82260746)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (82082827..82091183)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily, member 13c Neighboring gene centromere protein M Neighboring gene predicted gene, 52180 Neighboring gene septin 3 Neighboring gene WBP2 N-terminal like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC76505

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001395955.1NP_001382884.1  uncharacterized protein LOC76505

      Status: VALIDATED

      Source sequence(s)
      AK005178, BC094356
      Conserved Domains (1) summary
      PLN02960
      Location:2952
      PLN02960; alpha-amylase
    2. NM_001395956.1NP_001382885.1  uncharacterized protein LOC76505

      Status: VALIDATED

      Source sequence(s)
      AC104325
      Conserved Domains (1) summary
      PLN02960
      Location:2952
      PLN02960; alpha-amylase

    RNA

    1. NR_172943.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC104325

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      82136673..82144947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_037697.2: Suppressed sequence

      Description
      NR_037697.2: This RefSeq was removed because it is now thought that this gene does encode a protein.
    2. NR_037698.2: Suppressed sequence

      Description
      NR_037698.2: This RefSeq was removed because it is now thought that this gene does encode a protein.
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