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    BVK12_gp1 hypothetical protein [ Beihai picorna-like virus 16 ]

    Gene ID: 30763120, updated on 18-Aug-2023

    Summary

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    Gene symbol
    BVK12_gp1
    Gene description
    hypothetical protein
    Locus tag
    BVK12_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Beihai picorna-like virus 16 (strain: BHHK123579, nat-host: sea anemones)
    Lineage
    Viruses; unclassified RNA viruses
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    Genomic context

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    Sequence:
    NC_032607.1 (625..8349)

    NC_032607.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032607.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Redefining the invertebrate RNA virosphere. Shi M, et al. Nature, 2016 Dec 22. PMID 27880757

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032607.1 Reference assembly

      Range
      625..8349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009333546.1 hypothetical protein [Beihai picorna-like virus 16]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1L3KHC6, A0A1L3KHH5
      Conserved Domains (6) summary
      cd00205
      Location:1806 → 1981
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      cd01699
      Location:1335 → 1606
      RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
      pfam08762
      Location:2343 → 2564
      CRPV_capsid; CRPV capsid protein like
      pfam00548
      Location:1017 → 1122
      Peptidase_C3; 3C cysteine protease (picornain 3C)
      pfam11492
      Location:1996 → 2041
      Dicistro_VP4; Cricket paralysis virus, VP4
      cl21455
      Location:347 → 456
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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