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    B2K50_gp1 hypothetical protein [ Beihai picorna-like virus 59 ]

    Gene ID: 31079501, updated on 29-Jul-2022

    Summary

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    Gene symbol
    B2K50_gp1
    Gene description
    hypothetical protein
    Locus tag
    B2K50_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Beihai picorna-like virus 59 (strain: BHBei77099, nat-host: Bivalva)
    Lineage
    Viruses; unclassified RNA viruses
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    Genomic context

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    Sequence:
    NC_033822.1 (744..9077)

    NC_033822.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_033822.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Redefining the invertebrate RNA virosphere. Shi M, et al. Nature, 2016 Dec 22. PMID 27880757

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_033822.1 Reference assembly

      Range
      744..9077
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009345905.1 hypothetical protein [Beihai picorna-like virus 59]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1L3KH04
      Conserved Domains (5) summary
      cd00205
      Location:2358 → 2544
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam08762
      Location:2583 → 2771
      CRPV_capsid; CRPV capsid protein like
      pfam00548
      Location:1193 → 1288
      Peptidase_C3; 3C cysteine protease (picornain 3C)
      pfam00910
      Location:563 → 668
      RNA_helicase; RNA helicase
      cl02808
      Location:1434 → 1833
      RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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