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    BVK38_gp1 hypothetical protein [ Beihai picorna-like virus 60 ]

    Gene ID: 30762965, updated on 17-Aug-2018

    Summary

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    Gene symbol
    BVK38_gp1
    Gene description
    hypothetical protein
    Locus tag
    BVK38_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Beihai picorna-like virus 60 (strain: BHBei55726, nat-host: Bivalva)
    Lineage
    Viruses; unclassified RNA viruses
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    Genomic context

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    Sequence:
    NC_032546.1 (431..8728)

    NC_032546.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032546.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Redefining the invertebrate RNA virosphere. Shi M, et al. Nature, 2016 Dec 22. PMID 27880757

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032546.1 Reference assembly

      Range
      431..8728
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009333424.1 hypothetical protein [Beihai picorna-like virus 60]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1L3KH62
      Conserved Domains (6) summary
      cd00205
      Location:2004 → 2191
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam08762
      Location:2554 → 2761
      CRPV_capsid; CRPV capsid protein like
      pfam11492
      Location:2209 → 2259
      Dicistro_VP4; Cricket paralysis virus, VP4
      cl02808
      Location:1439 → 1708
      RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
      cl21455
      Location:530 → 629
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
      cl26511
      Location:49 → 262
      Neuromodulin_N; Gap junction protein N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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