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    CGU91_gp1 polyprotein [ Aimelvirus 2 ]

    Gene ID: 33350003, updated on 29-Jul-2022

    Summary

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    Gene symbol
    CGU91_gp1
    Gene description
    polyprotein
    Locus tag
    CGU91_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aimelvirus 2 (strain: gpai002)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Picornaviridae
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    Genomic context

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    Sequence:
    NC_035198.1 (1346..7975)

    NC_035198.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_035198.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Virome comparisons in wild-diseased and healthy captive giant pandas. Zhang W, et al. Microbiome, 2017 Aug 7. PMID 28780905, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    polyprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_035198.1 Reference assembly

      Range
      1346..7975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009389450.1 polyprotein [Aimelvirus 2]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A220IGD6
      Conserved Domains (6) summary
      cd00205
      Location:419 → 559
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00548
      Location:1534 → 1710
      Peptidase_C3; 3C cysteine protease (picornain 3C)
      pfam00910
      Location:1189 → 1290
      RNA_helicase; RNA helicase
      pfam08935
      Location:21 → 77
      VP4_2; Viral protein VP4 subunit
      cl02808
      Location:1753 → 2201
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
      cl13999
      Location:135 → 307
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
    Nucleotide Protein
    Heading Accession and Version

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