The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly

Genomic

1. NC_025821.1 Reference assembly

   Range

   140..9478

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. YP_009110712.1 polyprotein [Asparagus virus 1]

   See identical proteins and their annotated locations for YP_009110712.1

   Status: PROVISIONAL

   UniProtKB/TrEMBL

   A0A0A7DZK1, A0A0A7DZP8

   Conserved Domains (10) summary

   smart00487
   Location:1248 → 1417

   DEXDc; DEAD-like helicases superfamily

   cd00046
   Location:1273 → 1400

   DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

   pfam01577
   Location:100 → 332

   Peptidase_S30; Potyvirus P1 protease

   pfam00271
   Location:1443 → 1554

   Helicase_C; Helicase conserved C-terminal domain

   pfam00767
   Location:2878 → 3110

   Poty_coat; Potyvirus coat protein

   pfam00851
   Location:358 → 791

   Peptidase_C6; Helper component proteinase

   pfam00863
   Location:2082 → 2315

   Peptidase_C4; Peptidase family C4

   pfam08440
   Location:1579 → 1860

   Poty_PP; Potyviridae polyprotein

   pfam13608
   Location:807 → 1245

   Potyvirid-P3; Protein P3 of Potyviral polyprotein

   cl02808
   Location:2350 → 2811

   RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...