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    YJR107C-A uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 65052910, updated on 7-Sep-2023

    Summary

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    Gene symbol
    YJR107C-A
    Gene description
    uncharacterized protein
    Primary source
    SGD:S000303810
    Locus tag
    YJR107C-A
    See related
    AllianceGenome:SGD:S000303810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_001142.9 (628457..628693, complement)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Ecm27p Neighboring gene putative lipase Neighboring gene Abm1p Neighboring gene carbamoyl-phosphate synthase (glutamine-hydrolyzing) CPA2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001142.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteogenomic Discovery of a Small, Novel Protein in Yeast Reveals a Strategy for the Detection of Unannotated Short Open Reading Frames. Yagoub D, et al. J Proteome Res, 2015 Dec 4. PMID 26554900
    2. Enrichment-Based Proteogenomics Identifies Microproteins, Missing Proteins, and Novel smORFs in Saccharomyces cerevisiae. He C, et al. J Proteome Res, 2018 Jul 6. PMID 29897761
    3. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X. Galibert F, et al. EMBO J, 1996 May 1. PMID 8641269, Free PMC Article
    4. New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources. Engel SR, et al. Genetics, 2022 Apr 4. PMID 34897464, Free PMC Article
    5. Life with 6000 genes. Goffeau A, et al. Science, 1996 Oct 25. PMID 8849441

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular response to osmotic stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001381966.1
    • hypothetical protein; encodes new type of domain, which ab initio modeling suggests is predominantly alpha-helical; nonessential for growth, deletion increases sensitivity to osmostress; expressed at moderate to high abundance; ORF also present in strains EC1118, YJM789, RM11-1a, and AWRI1631; Gln24 in S288C reference is substituted with Arg in wine strain EC1118; predicted S-palmitoylation site on Cys2, suggesting membrane association; transcript previously mischaracterized as SUT646

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      628457..628693 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001395036.1 → NP_001381966.1  TPA: uncharacterized protein YJR107C-A [Saccharomyces cerevisiae S288C]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A8D9UGL5, P0CT86
      UniProtKB/TrEMBL
      C8ZBQ5
      Conserved Domains (1) summary
      pfam17220
      Location:1 → 76
      DUF5137; Protein of unknown function (DUF5137)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CT86.1

    Gene LinkOut

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