Genome

Geobacter sulfurreducens Common metal-reducing bacterium Lineage: Bacteria[37515]; Thermodesulfobacteriota[569]; Desulfuromonadia[91]; Geobacterales[52]; Geobacteraceae[51]; Geobacter[10]; Geobacter sulfurreducens[1]

Geobacter sulfurreducens. This organism, similar to what is observed in Geobacter metallireducens, is one of the predominant metal-reducing bacteria found in subsurface communities. It is capable of oxidizing organic compounds and coupling that to reduction of metals.

Summary Sequence data:  genome assemblies: 13  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 3.79531  median protein count: 3379  median GC%: 60.9 Publications (limited to 20 most recent records) MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy. Rocha U, et al. Mol Ecol Resour 2024 Feb Genome-centric analyses of 165 metagenomes show that mobile genetic elements are crucial for the transmission of antimicrobial resistance genes to pathogens in activated sludge and wastewater. Abdulkadir N, et al. Microbiol Spectr 2024 Mar 5 Complete Genome Sequence of Geobacter sulfurreducens Strain YM18, Isolated from River Sediment in Japan. Inoue K, et al. Genome Announc 2018 May 10 A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Parks DH, et al. Nat Biotechnol 2018 Nov Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production. Butler JE, et al. BMC Genomics 2012 Sep 12 De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads. Nagarajan H, et al. PLoS One 2010 Jun 8 Genome of Geobacter sulfurreducens: metal reduction in subsurface environments. Methé BA, et al. Science 2003 Dec 12 More...  Representative (genome information for reference and representative genomes) Reference genome:   Geobacter sulfurreducens PCA Submitter: TIGR Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes Environment: OxygenReq:Anaerobic, OptimumTemperature:30, TemperatureRange:Mesophilic, Habitat:Multiple Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NC_002939.5 AE017180.2 3.81 60.9 3,397 6 48 4 3,482 27 Dendrogram (based on genomic BLAST)