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Alternaria alternata
BLAST against Alternaria alternata genome, transcript, protein
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Organism Overview ; Genome Assembly and Annotation report
Alternaria alternata

Alternaria alternata apple and pear pathotypes Genome sequencing and assembly

Lineage: Eukaryota[15558]; Fungi[5219]; Dikarya[4852]; Ascomycota[3866]; Pezizomycotina[2637]; Dothideomycetes[449]; Pleosporomycetidae[225]; Pleosporales[203]; Pleosporineae[145]; Pleosporaceae[74]; Alternaria[42]; Alternaria sect. Alternaria[10]; Alternaria alternata complex[3]; Alternaria alternata[1]

Summary

Assembly level: Scaffold
Assembly: GCA_004154755.1 ASM415475v1 scaffolds: 735 contigs: 755 N50: 536,580 L50: 17
BioProjects: PRJNA360212
Whole Genome Shotgun (WGS): INSDC: PDXD00000000.1
Statistics: total length (Mb): 35.6334
 protein count: 13640
 GC%: 51.1

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein Gene Pseudogene
Un-.-35.6351.113,64013,5806

Genome Region

Alternaria alternata strain FERA 1177 contig_1, whole genome shotgun sequence

Go to nucleotide:GraphicsFASTAGenBank



Supplemental Content

Related information

  • Assembly
    Related Assembly records
  • BioProject
    Related BioProjects
  • Components
    Constituent nucleotide sequence
  • PubMed
    PubMed articles cited by genome record
  • Taxonomy
    Taxonomy sequences associated with genome record

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