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Eukaryotic RefSeq Genome Annotation Status

NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:

Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.

Annotation runs in progress

An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.

Species RefSeq assembly(ies) Annotation Release Freeze Date Status
Podarcis raffonei (Aeolian wall lizard) rPodRaf1.pri GCF_027172205.1-RS_2023_01 2023-01-27 Automated processing in progress
Nycticebus coucang (slow loris) mNycCou1.pri GCF_027406575.1-RS_2023_01 2023-01-27 Automated processing in progress
Panonychus citri (citrus red mite) ASM1489881v1 GCF_014898815.1-RS_2023_01 2023-01-26 Automated processing in progress
Scomber japonicus (chub mackerel) fScoJap1.pri GCF_027409825.1-RS_2023_01 2023-01-26 Automated processing in progress
Pangasianodon hypophthalmus (striped catfish) fPanHyp1.pri GCF_027358585.1-RS_2023_01 2023-01-25 Automated processing in progress
Odocoileus virginianus (white-tailed deer) Ovbor_1.1 GCF_023699985.1-RS_2023_01 2023-01-24 Automated processing in progress
Hemicordylus capensis (graceful crag lizard) rHemCap1.1.pri (GCF_027244095.1) GCF_027244095.1-RS_2023_01 2023-01-23 In sequence databases

On the FTP
Acinonyx jubatus (cheetah) VMU_Ajub_asm_v1.0 GCF_027475565.1-RS_2023_01 2023-01-23 Automated processing in progress
Bombina bombina (fire-bellied toad) aBomBom1.pri GCF_027579735.1-RS_2023_01 2023-01-23 Automated processing in progress
Cherax quadricarinatus (Australian red claw crayfish) ASM2687515v2 GCF_026875155.1-RS_2023_01 2023-01-17 Automated processing in progress
Mercenaria mercenaria (northern quahog) MADL_Memer_1 GCF_021730395.1-RS_2023_01 2023-01-14 Automated processing in progress

Recently completed annotation runs

Genomes annotated in the past 6 weeks.

Species RefSeq assembly(ies) Annotation Release Freeze Date Release Date Links
Gossypium arboreum (tree cotton) ASM2569848v2 (GCF_025698485.1) GCF_025698485.1-RS_2022_12 2022-12-16 2023-01-20 FTP B AR GDV
Anopheles moucheti (mosquitos) idAnoMoucSN_F20_07 (GCF_943734755.1) GCF_943734755.1-RS_2023_01 2023-01-17 2023-01-19 FTP B AR GDV
Anopheles cruzii (mosquitos) idAnoCruzAS_RS32_06 (GCF_943734635.1) GCF_943734635.1-RS_2023_01 2023-01-11 2023-01-19 FTP B AR GDV
Octopus bimaculoides (cephalopods) ASM119413v2 (GCF_001194135.2) GCF_001194135.2-RS_2023_01 2023-01-05 2023-01-14 FTP B AR GDV
Drosophila gunungcola (flies) Dgunungcola_SK_2 (GCF_025200985.1) GCF_025200985.1-RS_2023_01 2023-01-12 2023-01-14 FTP B AR GDV
Mya arenaria (softshell) ASM2691426v1 (GCF_026914265.1) GCF_026914265.1-RS_2023_01 2023-01-06 2023-01-13 FTP B AR GDV
Bicyclus anynana (squinting bush brown) ilBicAnyn1.1 (GCF_947172395.1) GCF_947172395.1-RS_2022_12 2022-12-21 2022-12-29 FTP B AR GDV
Galleria mellonella (greater wax moth) CSIRO_AGI_GalMel_v1 (GCF_026898425.1) GCF_026898425.1-RS_2022_12 2022-12-22 2022-12-28 FTP B AR GDV
Vigna angularis (adzuki bean) ASM1680809v1 (GCF_016808095.1) GCF_016808095.1-RS_2022_12 2022-12-16 2022-12-28 FTP B AR GDV
Crassostrea angulata (Portugese oyster) ASM2561291v2 (GCF_025612915.1) GCF_025612915.1-RS_2022_12 2022-12-22 2022-12-23 FTP B AR GDV
Harpia harpyja (Harpy eagle) bHarHar1 primary haplotype (GCF_026419915.1) GCF_026419915.1-RS_2022_12 2022-12-22 2022-12-23 FTP B AR GDV
Lactuca sativa (eudicots) Lsat_Salinas_v11 (GCF_002870075.4) GCF_002870075.4-RS_2022_12 2022-12-16 2022-12-22 FTP B AR GDV
Culex pipiens pallens (northern house mosquito) TS_CPP_V2 (GCF_016801865.2) GCF_016801865.2-RS_2022_12 2022-12-15 2022-12-19 FTP B AR GDV

Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.

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Last updated: 2019-04-12T14:50:38Z