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Pectobacterium atrosepticum
Representative genome: Pectobacterium atrosepticum
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BLAST against Pectobacterium atrosepticum genome, protein
All 23 genomes for species:
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ID: 1088
Organism ImagePectobacterium atrosepticum

Causative agent for blackleg and soft rot disease in potatoes

Lineage: Bacteria[37505]; Pseudomonadota[11106]; Gammaproteobacteria[4596]; Enterobacterales[798]; Pectobacteriaceae[66]; Pectobacterium[23]; Pectobacterium atrosepticum[1]
Pectobacterium. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular More...

Summary

Sequence data: genome assemblies: 23 (See  Genome Assembly and Annotation report)
Statistics: median total length (Mb): 4.9452
 median protein count: 4281
 median GC%: 51

 Representative (genome information for reference and representative genomes)

    Reference genome:

    • minus sign  Pectobacterium atrosepticum ASM74096v1

      Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes

      Environment: OxygenReq:Facultative, OptimumTemperature:25C, TemperatureRange:Mesophilic, Habitat:Terrestrial

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NZ_CP009125.1CP009125.14.9951.14,338227794,51165
      PlsmpPA21ANZ_CP009126.1CP009126.10.0347.032---331

Dendrogram (based on genomic BLAST)

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