U.S. flag

An official website of the United States government

Vibrio parahaemolyticus
Reference genome: Vibrio parahaemolyticus RIMD 2210633
Download sequences in FASTA format for genome, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Vibrio parahaemolyticus genome, protein
All 2426 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Format

Send to:

Choose Destination

Links from BioProject

ID: 691
Vibrio parahaemolyticus

Food poisoning bacterium

Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Vibrionales[243]; Vibrionaceae[241]; Vibrio[164]; Vibrio harveyi group[14]; Vibrio parahaemolyticus[1]
Vibrio. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans.Vibrio parahaemolyticus More...

Summary

Sequence data: genome assemblies: 2491; sequence reads: 5 (See  Genome Assembly and Annotation report)
Statistics: median total length (Mb): 5.11848
 median protein count: 4573
 median GC%: 45.3

Publications (limited to 20 most recent records)

More...

 Representative (genome information for reference and representative genomes)

    Reference genome:

    • minus sign  Vibrio parahaemolyticus RIMD 2210633

      Submitter: Osaka Univ.

      Human Pathogen

      Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes

      Environment: OxygenReq:Facultative, OptimumTemperature:20-30, TemperatureRange:Mesophilic, Habitat:Aquatic

      Phenotype: Disease:Gastroenteritis

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr1NC_004603.1BA000031.23.2945.42,8993111343,07629
      Chr2NC_004605.1BA000032.21.8845.41,620314-1,65922

Dendrogram (based on genomic BLAST)

Supplemental Content

Tools

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center