Trachemys scripta (red-eared slider turtle)
Representative genome: Trachemys scripta elegans (assembly CAS_Tse_1.0)
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ID: 12454
Trachemys scripta (red-eared slider turtle)

Trachemys scripta overview

Lineage: Eukaryota[8504]; Metazoa[4118]; Chordata[2041]; Craniata[2019]; Vertebrata[2019]; Euteleostomi[2002]; Archelosauria[566]; Testudinata[25]; Testudines[25]; Cryptodira[21]; Durocryptodira[17]; Testudinoidea[13]; Emydidae[5]; Trachemys[1]; Trachemys scripta[1]

Summary

Submitter: California Academy of Sciences
Assembly level: Chromosome
Assembly: GCA_013100865.1 CAS_Tse_1.0 scaffolds: 138 contigs: 17,980 N50: 204,575 L50: 2,897
BioProjects: PRJNA634151
Whole Genome Shotgun (WGS): INSDC: VIRI00000000.1
Statistics: total length (Mb): 2126.2
 protein count: 42076
 GC%: 44.0461
NCBI Annotation Release:  100

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
Chr1NC_048298.1CM023056.1347.6643.15,5261346463,01590
Chr2NC_048299.1CM023057.1283.143.14,143-175792,14649
Chr3NC_048300.1CM023058.1201.2442.72,832-184511,51954
Chr4NC_048301.1CM023059.1142.3444.23,265-183441,65745
Chr5NC_048302.1CM023060.1140.4142.42,098-1228599815
Chr6NC_048303.1CM023061.1129.6842.41,7851830395317
Chr7NC_048304.1CM023062.1126.8143.92,743-93311,28322
Chr8NC_048305.1CM023063.1109.3144.02,228-32541,06822
Chr9NC_048306.1CM023064.1104.9744.12,007122951,04810
Chr10NC_048307.1CM023065.185.8344.92,066-1226499010
Chr11NC_048308.1CM023066.176.0542.91,412-516064415
Chr12NC_048309.1CM023067.145.0646.01,308-314696885
Chr13NC_048310.1CM023068.143.7244.2796-91364755
Chr14NC_048311.1CM023069.142.2247.01,441-2912388764
Chr15NC_048312.1CM023070.132.2145.81,009-6964586
Chr16NC_048313.1CM023071.130.0552.81,396-131008586
Chr17NC_048314.1CM023072.126.8346.8887-4953866
Chr18NC_048315.1CM023073.124.7745.7743-21234185
Chr19NC_048316.1CM023074.122.8147.2663-2693213
Chr20NC_048317.1CM023075.119.3748.5580-1713103
Chr21NC_048318.1CM023076.119.0547.048633522457
Chr22NC_048319.1CM023077.116.4450.4654-5623571
Chr23NC_048320.1CM023078.116.0750.0584-8343182
Chr24NC_048321.1CM023079.115.1551.5647123242114
Chr25NC_048322.1CM023080.17.1350.1251-1126629312
MTNC_011573.1-0.0238.713222-37-
Un-.-17.949.5513-57240711

Chromosomes

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