Genome

Bombyx mori (domestic silkworm) Pheromones were initially identified in silkworms, which are now studied for silk quality improvement Lineage: Eukaryota[15558]; Metazoa[7784]; Ecdysozoa[3516]; Arthropoda[3302]; Hexapoda[2974]; Insecta[2840]; Pterygota[2838]; Neoptera[2819]; Endopterygota[2629]; Lepidoptera[1167]; Glossata[1164]; Ditrysia[1161]; Bombycoidea[31]; Bombycidae[4]; Bombycinae[4]; Bombyx[3]; Bombyx mori[1]

The silkworm Bombyx mori has been domesticated for silk production for about 5,000 years and intensively studied. As a result, knowledge of its biology and genetics is the most advanced of any lepidopteran species. Comparison with its wild ancestor B. mandarina provides the opportunity to examine the effects of artificial selection leading More...to domestication at the genome level.Lepidoptera genomes are unusual in that they have holocentric chromosomes with diffuse kinetochores; as a result, they are able to retain chromosome fragments through many cell divisions. Silkworm is a female-heterogametic species with a ZW chromosome combination specifying female, and ZZ male. Interactions between Lepidoptera and baculoviruses have led to important biotechnological advances in recombinant protein production, and point toward enhancing the efficacy of these environmentally benign biological control agents. Other viruses (polydnaviruses) are able to modulate the lepidopteran endocrine and immune systems, and are vectored by hymenopteran parasites used in biological control. Less...

Summary Sequence data:  genome assemblies: 9; sequence reads: 11  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 453.326  median protein count: 13654  median GC%: 38.4495 NCBI Annotation Release:  104 Publications (limited to 20 most recent records) The silkworm W chromosome is a source of female-enriched piRNAs. Kawaoka S, et al. RNA 2011 Dec The genome of a lepidopteran model insect, the silkworm Bombyx mori. International Silkworm Genome Consortium Insect Biochem Mol Biol 2008 Dec The genome sequence of silkworm, Bombyx mori. Mita K, et al. DNA Res 2004 Feb 29 A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Xia Q, et al. Science 2004 Dec 10 More...  Representative (genome information for reference and representative genomes) Reference genome:   Bombyx mori ASM3026992v2 Submitter: Shimada-lab Faculty of Science Department of Life Science, Gakushuin University Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Chr 1 - AP028171.1 20.73 36.7 - - - - - Chr 2 - AP028172.1 8.41 39.9 - - - - - Chr 3 - AP028173.1 15.28 38.3 - - - - - Chr 4 - AP028174.1 18.98 38.2 - - - - - Chr 5 - AP028175.1 19.04 37.8 - - - - - Chr 6 - AP028176.1 16.78 38.2 - - - - - Chr 7 - AP028177.1 14 38.5 - - - - - Chr 8 - AP028178.1 16.31 38.2 - - - - - Chr 9 - AP028179.1 16.92 38.1 - - - - - Chr 10 - AP028180.1 17.8 38.0 - - - - - Chr 11 - AP028181.1 20.81 38.3 - - - - - Chr 12 - AP028182.1 17.84 38.4 - - - - - Chr 13 - AP028183.1 17.89 38.1 - - - - - Chr 14 - AP028184.1 13.34 38.4 - - - - - Chr 15 - AP028185.1 18.56 38.0 - - - - - Chr 16 - AP028186.1 14.45 38.9 - - - - - Chr 17 - AP028187.1 16.89 38.5 - - - - - Chr 18 - AP028188.1 15.96 38.4 - - - - - Chr 19 - AP028189.1 15.03 38.6 - - - - - Chr 20 - AP028190.1 12.71 39.5 - - - - - Chr 21 - AP028191.1 15.39 38.5 - - - - - Chr 22 - AP028192.1 18.55 38.1 - - - - - Chr 23 - AP028193.1 21.56 38.8 - - - - - Chr 24 - AP028194.1 19.29 41.0 - - - - - Chr 25 - AP028195.1 14.58 38.4 - - - - - Chr 26 - AP028196.1 11.61 38.7 - - - - - Chr 27 - AP028197.1 11.09 39.0 - - - - - Chr 28 - AP028198.1 10.67 39.5 - - - - - Chr W - AP028199.1 11.22 46.0 - - - - - MT NC_002355.1 - 0.02 18.7 13 2 22 - 37 Chromosomes Click on chromosome name to open Genome Data Viewer External Resources Animal Diversity Web BombMap Bombyx mori Images CHORI BAC Library Genetic Resources of Silkworm International Lepidopteran Genome Project KAIKObase Lepidoptera Taxome Project NEWT OGRe. OrthoDB SilkBase SilkDB Silkworm Genome Research Program White Paper