Onychostoma macrolepis (ID 24593) - Genome

Onychostoma macrolepis
Representative genome: Onychostoma macrolepis (assembly ASM1243209v1)
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BLAST against Onychostoma macrolepis genome, transcript, protein

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ID: 24593

Organism Overview ; Organelle Annotation Report [1]

Onychostoma macrolepis

Onychostoma macrolepis overview

Lineage: Eukaryota[15557]; Metazoa[7782]; Chordata[3579]; Craniata[3544]; Vertebrata[3544]; Euteleostomi[3500]; Actinopterygii[1301]; Neopterygii[1292]; Teleostei[1289]; Ostariophysi[267]; Cypriniformes[129]; Cyprinidae[45]; Acrossocheilinae[3]; Onychostoma[1]; Onychostoma macrolepis[1]

Onychostoma macrolepis genome reference project

Summary

Submitter:

SOUTHWEST UNIVERSITY

Assembly level:

Chromosome

Assembly:

GCA_012432095.1 ASM1243209v1 scaffolds: 353 contigs: 970 N50: 10,809,623 L50: 24

BioProjects:

PRJNA999377

Whole Genome Shotgun (WGS):

INSDC: JAAMOB000000000.1

Statistics:

total length (Mb): 886.586

protein count: 24767

GC%: 37.2774

NCBI Annotation Release:

100

Publications (limited to 20 most recent records)

Chromosome-level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of nanopore sequencing, Bionano and Hi-C technology. Sun L, et al. Mol Ecol Resour 2020 Sep
Mitochondrial genome of Onychostoma macrolepis (Osteichthyes: Cyprinidae). Chai A, et al. Mitochondrial DNA A DNA Mapp Seq Anal 2016

Replicon Info

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene
Chr	01	-	CM022810.1	47.78	37.1	1,276	-	-	-	1,276

Chr	02	-	CM022811.1	36.54	37.2	1,226	-	-	-	1,226

Chr	03	-	CM022812.1	56.49	37.8	1,710	-	-	-	1,710

Chr	04	-	CM022813.1	36.17	37.7	1,024	-	-	-	1,024

Chr	05	-	CM022814.1	45.98	37.3	1,298	-	-	-	1,298

Chr	06	-	CM022815.1	33.97	37.0	952	-	-	-	952

Chr	07	-	CM022816.1	49.2	37.5	1,284	-	-	-	1,284

Chr	08	-	CM022817.1	29.49	36.9	937	-	-	-	937

Chr	09	-	CM022818.1	37.34	37.3	884	-	-	-	884

Chr	10	-	CM022794.1	26.93	37.2	802	-	-	-	802

Chr	11	-	CM022795.1	29.38	37.4	803	-	-	-	803

Chr	12	-	CM022796.1	31.41	37.2	823	-	-	-	823

Chr	13	-	CM022797.1	32.81	37.2	849	-	-	-	849

Chr	14	-	CM022798.1	32.53	37.4	820	-	-	-	820

Chr	15	-	CM022799.1	31.81	37.1	836	-	-	-	836

Chr	16	-	CM022800.1	36.7	37.4	1,060	-	-	-	1,060

Chr	17	-	CM022801.1	32.21	37.1	857	-	-	-	857

Chr	18	-	CM022802.1	34.19	37.4	775	-	-	-	775

Chr	19	-	CM022803.1	34.07	37.2	989	-	-	-	989

Chr	20	-	CM022804.1	32.79	37.2	941	-	-	-	941

Chr	21	-	CM022805.1	31.71	37.3	963	-	-	-	963

Chr	22	-	CM022806.1	38.41	37.0	1,015	-	-	-	1,015

Chr	23	-	CM022807.1	30.44	37.2	946	-	-	-	946

Chr	24	-	CM022808.1	27.7	36.8	688	-	-	-	688

Chr	25	-	CM022809.1	25.27	36.8	787	-	-	-	787

	-	NC_023799.1	-	0.02	44.2	13	2	22	-	13

Un	-	.	-	5.26	40.9	209	-	-	-	209

Chromosomes

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