Motacilla alba (ID 43097) - Genome

Motacilla alba (white wagtail)
Representative genome: Motacilla alba alba (assembly Motacilla_alba_V1.0_pri)
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All 3 genomes for species:
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ID: 43097

Organism Overview ; Genome Assembly and Annotation report [3] ; Organelle Annotation Report [1]

Motacilla alba (white wagtail)

Motacilla alba overview

Lineage: Eukaryota[15557]; Metazoa[7782]; Chordata[3579]; Craniata[3544]; Vertebrata[3544]; Euteleostomi[3500]; Archelosauria[1076]; Archosauria[1039]; Dinosauria[1034]; Saurischia[1034]; Theropoda[1034]; Coelurosauria[1034]; Aves[1034]; Neognathae[1009]; Passeriformes[351]; Passeroidea[74]; Motacillidae[2]; Motacilla[2]; Motacilla alba[1]

Summary

Sequence data:

genome assemblies: 3

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 1043.12

median protein count: 27892

median GC%: 41.5

NCBI Annotation Release:

100

Publications (limited to 20 most recent records)

Dense sampling of bird diversity increases power of comparative genomics. Feng S, et al. Nature 2020 Nov
Complete mitochondrial genome of Motacilla alba and implications for Motacillidae taxonomy. Dong X, et al. Mitochondrial DNA A DNA Mapp Seq Anal 2016 Nov

Representative (genome information for reference and representative genomes)

Reference genome:

Motacilla alba alba

Submitter: Uppsala University

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	1	NC_052016.1	CM027476.1	115.94	39.9	3,473	-	15	425	1,334	5

Chr	2	NC_052017.1	CM027477.1	152.2	39.7	4,045	-	41	496	1,671	7

Chr	3	NC_052018.1	CM027478.1	113.98	40.3	3,519	-	13	389	1,423	10

Chr	4	NC_052019.1	CM027479.1	72.57	40.0	2,355	-	-	336	915	1

Chr	5	NC_052020.1	CM027480.1	62.42	41.7	2,827	-	6	293	1,118	2

Chr	6	NC_052021.1	CM027481.1	36.2	42.9	1,648	-	2	174	622	-

Chr	7	NC_052022.1	CM027482.1	38.39	42.1	1,743	-	22	165	597	1

Chr	8	NC_052023.1	CM027483.1	30.93	43.0	1,382	-	3	228	598	1

Chr	9	NC_052024.1	CM027484.1	25.5	44.0	1,231	46	14	114	551	1

Chr	10	NC_052025.1	CM027485.1	20.67	44.3	986	-	7	92	434	1

Chr	11	NC_052026.1	CM027486.1	21.12	43.8	838	-	13	131	434	2

Chr	12	NC_052027.1	CM027487.1	21.16	45.0	981	-	1	150	398	-

Chr	13	NC_052028.1	CM027488.1	18.32	46.0	878	-	-	90	415	4

Chr	14	NC_052029.1	CM027489.1	16.6	46.4	1,056	-	4	105	459	2

Chr	15	NC_052030.1	CM027490.1	14.05	47.7	965	-	5	82	400	1

Chr	1A	NC_052031.1	CM027505.1	72.39	40.7	2,649	-	5	383	1,098	6

Chr	17	NC_052032.1	CM027491.1	11.27	49.6	795	-	2	69	315	-

Chr	18	NC_052033.1	CM027492.1	12.11	48.1	755	-	8	68	349	-

Chr	19	NC_052034.1	CM027493.1	11.14	48.6	785	-	1	85	364	1

Chr	20	NC_052035.1	CM027494.1	15.46	48.0	870	-	2	52	383	2

Chr	21	NC_052036.1	CM027495.1	8.01	49.5	612	-	-	44	274	-

Chr	22	NC_052037.1	CM027496.1	4.81	53.0	390	-	1	16	208	-

Chr	23	NC_052038.1	CM027497.1	6.79	52.8	565	-	-	45	266	-

Chr	24	NC_052039.1	CM027498.1	7.38	50.8	459	-	-	34	175	-

Chr	25	NC_052040.1	CM027499.1	2.39	56.8	439	-	2	23	256	-

Chr	26	NC_052041.1	CM027500.1	6.24	53.5	546	-	2	27	266	-

Chr	27	NC_052042.1	CM027501.1	5.14	53.5	581	-	10	27	337	20

Chr	28	NC_052043.1	CM027502.1	5.44	53.8	640	-	4	32	281	-

Chr	29	NC_052044.1	CM027503.1	2.19	57.2	247	-	-	15	146	-

Chr	4A	NC_052045.1	CM027506.1	19.75	45.0	909	-	2	124	397	-

Chr	Z	NC_052046.1	CM027504.1	75.74	39.8	2,426	-	1	415	921	3

	MT	NC_029229.1	-	0.02	46.3	13	2	22	-	37	-

Un	-	.	-	46.37	54.9	638	7	10	117	605	15

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