Genome

Acropora millepora A hard coral from shallow, tropical waters Lineage: Eukaryota[15558]; Metazoa[7784]; Cnidaria[163]; Anthozoa[108]; Hexacorallia[98]; Scleractinia[47]; Astrocoeniina[31]; Acroporidae[27]; Acropora[20]; Acropora millepora[1]

Acropora millepora.This species dominates the coral reefs in shallow tropical waters from South Africa north to the Red Sea, and east through the tropical Western Pacific. It is a hard coral, with mostly vertical growth. Nonreproductive polyps extend from vertical branch tips. Reproductive polyps occur laterally. This coral requires adequate More...light to thrive, and this factor limits maximum coral growth. As water depth increases, light intensity decreases, and there is also a change in spectral quality. Less...

Summary Sequence data:  genome assemblies: 2  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 430.99  median protein count: 41860  median GC%: 37.0827 NCBI Annotation Release:  101 Publications (limited to 20 most recent records) Population genetics of the coral Acropora millepora: Toward genomic prediction of bleaching. Fuller ZL, et al. Science 2020 Jul 17 The Whole-Genome Sequence of the Coral Acropora millepora. Ying H, et al. Genome Biol Evol 2019 May 1 Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages. Ying H, et al. Genome Biol 2018 Nov 2  Representative (genome information for reference and representative genomes) Reference genome:   Acropora millepora Amil_v2.1 Submitter: Columbia Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr 1 NC_058066.1 CM024249.1 39.36 39.0 3,483 - 85 642 3,367 442 Chr 2 NC_058067.1 CM024250.1 37.39 39.1 3,896 - 52 508 3,371 312 Chr 3 NC_058068.1 CM024251.1 19.5 39.0 1,952 - 47 413 1,738 134 Chr 4 NC_058069.1 CM024252.1 29.33 39.1 2,925 - 76 443 2,665 291 Chr 5 NC_058070.1 CM024253.1 31.09 39.0 3,056 - 28 583 2,755 308 Chr 6 NC_058071.1 CM024254.1 19.84 39.1 1,978 - 15 322 1,725 161 Chr 7 NC_058072.1 CM024255.1 24.21 39.1 2,142 3 94 411 2,144 280 Chr 8 NC_058073.1 CM024256.1 17.82 38.9 1,684 10 28 356 1,564 191 Chr 9 NC_058074.1 CM024257.1 19.71 38.9 1,849 - 44 336 1,880 265 Chr 10 NC_058075.1 CM024258.1 21.76 39.0 1,867 1 193 487 2,067 267 Chr 11 NC_058076.1 CM024259.1 16.85 38.9 1,406 - 39 359 1,427 220 Chr 12 NC_058077.1 CM024260.1 23.33 39.1 2,419 - 56 340 2,195 200 Chr 13 NC_058078.1 CM024261.1 22.34 38.9 2,389 - 102 395 2,167 217 Chr 14 NC_058079.1 CM024262.1 17.42 38.9 1,803 - 12 366 1,640 216 Un - . - 135.42 39.2 9,011 269 542 2,466 12,070 2,367 Chromosomes Click on chromosome name to open Genome Data Viewer