Lepisosteus oculatus (spotted gar)
Representative genome: Lepisosteus oculatus (assembly LepOcu1)
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ID: 10597
Lepisosteus oculatus (spotted gar)

Lepisosteus oculatus overview

Lineage: Eukaryota[8697]; Metazoa[4225]; Chordata[2098]; Craniata[2075]; Vertebrata[2075]; Euteleostomi[2058]; Actinopterygii[771]; Neopterygii[765]; Holostei[3]; Semionotiformes[2]; Lepisosteidae[2]; Lepisosteus[1]; Lepisosteus oculatus[1]
The spotted gar is a large, freshwater ray-finned fish native to North America. The gar and teleost lineages diverged prior to the teleost genome duplication. Studies of the spotted gar may facilitate making connections between models of human development and disease established in zebrafish and other teleosts, and the human genome.

Summary

Submitter: Broad Institute
Assembly level: Chromosome
Assembly: GCA_000242695.1 LepOcu1 scaffolds: 2,106 contigs: 45,200 N50: 68,337 L50: 3,307
BioProjects: PRJNA221149, PRJNA68247
Whole Genome Shotgun (WGS): INSDC: AHAT00000000.1
Statistics: total length (Mb): 945.878
 protein count: 41647
 GC%: 40.4083
NCBI Annotation Release:  101

Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
groupLG1NC_023179.1CM001404.169.0739.42,712-282111,3715
groupLG2NC_023180.1CM001405.168.5839.72,659-652661,4864
groupLG3NC_023181.1CM001406.156.840.13,165-152181,52011
groupLG4NC_023182.1CM001407.173.239.72,504-151691,1557
groupLG5NC_023183.1CM001408.151.4239.42,678-241931,2365
groupLG6NC_023184.1CM001409.140.7741.31,965-162171,0747
groupLG7NC_023185.1CM001410.150.8139.92,081-121741,0478
groupLG8NC_023186.1CM001411.150.3538.71,790-91658785
groupLG9NC_023187.1CM001412.153.2438.71,865-451539282
groupLG10NC_023188.1CM001413.142.3540.02,075-182251,0406
groupLG11NC_023189.1CM001414.141.5338.51,672-81558022
groupLG12NC_023190.1CM001415.136.4240.01,668-91548555
groupLG13NC_023191.1CM001416.117.1242.51,048-61685563
groupLG14NC_023192.1CM001417.132.3740.01,477-331137934
groupLG15NC_023193.1CM001418.110.6444.4635-1669359-
groupLG16NC_023194.1CM001419.121.1739.31,096-41015131
groupLG17NC_023195.1CM001420.132.638.81,375-81016162
groupLG18NC_023196.1CM001421.115.6841.3817-5784352
groupLG19NC_023197.1CM001422.19.9145.1700-9503841
groupLG20NC_023198.1CM001423.114.7441.8805-11664513
groupLG21NC_023199.1CM001424.115.1441.9854-1733711
groupLG22NC_023200.1CM001425.111.6244.0764-4673911
groupLG23NC_023201.1CM001426.117.0440.4904-1295477-
groupLG24NC_023202.1CM001427.19.4947.8626-11774724
groupLG25NC_023203.1CM001428.114.3942.1657-290356-
groupLG26NC_023204.1CM001429.113.7743.1738-2151437-
groupLG27NC_023205.1CM001430.115.2639.9813-387366-
groupLG28NC_023206.1CM001431.15.3850.6194-1241784
groupLG29NC_023207.1CM001432.10.2948.07---7-
MTNC_004744.1-0.0242.413222-37-
Un-.-54.7244.11,290-953371,32824

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