Genome

Vibrio splendidus Fish and shellfish pathogen Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Vibrionales[243]; Vibrionaceae[241]; Vibrio[164]; Vibrio splendidus[1]

Vibrio. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans.Vibrio splendidus More.... This organism is composed of two biogroups based on DNA-DNA hybridization and characteristics. For example, biogroup 1 are bioluminescent while biogroup 2 are not. This microbe inflicts disease and death in many marine species causing massive damage to industries devoted to their production, including fish, oysters, mussels, and scallops. Less...

Summary Sequence data:  genome assemblies: 203  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 5.4513  median protein count: 4666  median GC%: 44.1 Publications (limited to 20 most recent records) Resolving the structure of phage-bacteria interactions in the context of natural diversity. Kauffman KM, et al. Nat Commun 2022 Jan 18 Can only one physiological trait determinate the adverse effect of green fluorescent protein (GFP) incorporation on Vibrio virulence? Wang D, et al. Appl Microbiol Biotechnol 2021 Oct Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages. Hussain FA, et al. Science 2021 Oct 22 Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach. Jiang C, et al. Curr Microbiol 2021 Dec 14 A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria. Kauffman KM, et al. Nature 2018 Feb 1 Draft Genome Sequences of Two Vibrio splendidus Strains, Isolated from Seagrass Sediment. Lee RD, et al. Genome Announc 2016 Feb 18 Microbial interactions lead to rapid micro-scale successions on model marine particles. Datta MS, et al. Nat Commun 2016 Jun 17 Vibrio hemicentroti sp. nov., an alginate lyase-producing bacterium, isolated from the gut microflora of sea urchin (Hemicentrotus pulcherrimus). Kim D, et al. Int J Syst Evol Microbiol 2013 Oct Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea. Hoffmann M, et al. Int J Syst Evol Microbiol 2012 Aug Population genomics of early events in the ecological differentiation of bacteria. Shapiro BJ, et al. Science 2012 Apr 6 Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance. Cordero OX, et al. Science 2012 Sep 7 Resource partitioning and sympatric differentiation among closely related bacterioplankton. Hunt DE, et al. Science 2008 May 23 More...  Representative (genome information for reference and representative genomes) Reference genome:   Vibrio splendidus ASM2281204v1 Submitter: The Roslin Institute, University of Edinburgh Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr 1 NZ_CP089203.1 CP089203.1 3.56 44.3 3,035 43 120 4 3,225 23 Chr 2 NZ_CP089204.1 CP089204.1 1.89 44.1 1,540 3 17 - 1,581 21 Dendrogram (based on genomic BLAST) External Resources Seagrass Microbiome Project