Genome

Actinomyces oris Oral bacterium involved in dental plaque formation Lineage: Bacteria[37505]; Actinomycetota[4918]; Actinomycetes[4472]; Actinomycetales[143]; Actinomycetaceae[134]; Actinomyces[48]; Actinomyces oris[1]

Actinomyces oris. Actinomyces oris, formerly Actinomyces naeslundii, is part of the normal oral microflora in humans and plays a role in the formation of dental plaque. This organism creates a biofilm on the dental surface which provides a suitable matrix for colonization by other oral bacterium.

Summary Sequence data:  genome assemblies: 65  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 3.04054  median protein count: 2518  median GC%: 68.7 Publications (limited to 20 most recent records) Genome Investigation of Urinary Gardnerella Strains and Their Relationship to Isolates of the Vaginal Microbiota. Putonti C, et al. mSphere 2021 May 12 MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8 Insights Obtained by Culturing Saccharibacteria With Their Bacterial Hosts. Bor B, et al. J Dent Res 2020 Jun Aerococcus urinae Isolated from Women with Lower Urinary Tract Symptoms: In Vitro Aggregation and Genome Analysis. Hilt EE, et al. J Bacteriol 2020 Jun 9 Tannerella serpentiformis sp. nov., isolated from the human mouth. Ansbro K, et al. Int J Syst Evol Microbiol 2020 Jun Acinetobacter portensis sp. nov. and Acinetobacter guerrae sp. nov., isolated from raw meat. Carvalheira A, et al. Int J Syst Evol Microbiol 2020 Aug Complete Genome Sequence of Strain BB001, a Novel Epibiont Bacterium from the Candidate Phylum Saccharibacteria (TM7). Lamont EI, et al. Microbiol Resour Announc 2020 Aug 20 Corynebacterium alimapuense sp. nov., an obligate marine actinomycete isolated from sediment of Valparaíso bay, Chile. Claverías F, et al. Int J Syst Evol Microbiol 2019 Mar FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25 Scandinavium goeteborgense gen. nov., sp. nov., a New Member of the Family Enterobacteriaceae Isolated From a Wound Infection, Carries a Novel Quinolone Resistance Gene Variant. Marathe NP, et al. Front Microbiol 2019 EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Mitchell AL, et al. Nucleic Acids Res 2018 Jan 4 Genome Sequences of Two Naphthalene-Degrading Strains of Pseudomonas balearica, Isolated from Polluted Marine Sediment and from an Oil Refinery Site. Salvà-Serra F, et al. Genome Announc 2017 Apr 6 Pathogenicity of exopolysaccharide-producing Actinomyces oris isolated from an apical abscess lesion. Yamane K, et al. Int Endod J 2013 Feb Identification of the genes involved in the biofilm-like structures on actinomyces oris K20, a clinical isolate from an apical lesion. Mashimo C, et al. J Endod 2013 Jan Emended description of Actinomyces naeslundii and descriptions of Actinomyces oris sp. nov. and Actinomyces johnsonii sp. nov., previously identified as Actinomyces naeslundii genospecies 1, 2 and WVA 963. Henssge U, et al. Int J Syst Evol Microbiol 2009 Mar Pharmaceutical interaction of lidocaine hydrochloride and sodium carboxymethylcellulose in "hydrocortisonum" suspension. Meler J, et al. Pharmazie 1990 Sep More...  Representative (genome information for reference and representative genomes) Reference genome:   Actinomyces oris ASM1612795v1 Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NZ_CP066060.1 CP066060.1 3.18 68.5 2,575 9 52 3 2,662 23 Plsm unnamed NZ_CP066061.1 CP066061.1 0.01 44.3 - 2 - - 2 - Dendrogram (based on genomic BLAST)