Severe acute respiratory syndrome-related coronavi... (ID 10320) - Genome - NCBI

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Severe acute respiratory syndrome-related coronavirus
Reference genome: SARS coronavirus Tor2
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ID: 10320

Organism Overview ; Genome Assembly and Annotation report [172]

Severe acute respiratory syndrome-related coronavirus

Severe acute respiratory syndrome-related coronavirus overview

Lineage: Viruses[32582]; Riboviria[7831]; Orthornavirae[6385]; Pisuviricota[1796]; Pisoniviricetes[1137]; Nidovirales[254]; Cornidovirineae[164]; Coronaviridae[164]; Orthocoronavirinae[146]; Betacoronavirus[53]; Sarbecovirus[21]; Severe acute respiratory syndrome-related coronavirus[8]

Summary

Sequence data:

genome assemblies: 172; sequence reads: 51

Statistics:

median total length (Mb): 0.029751

median protein count: 11

median GC%: 40.8

Publications (limited to 20 most recent records)

Isolation, propagation, genome analysis and epidemiology of HKU1 betacoronaviruses. Dominguez SR, et al. J Gen Virol 2014 Apr
Characterization of a recombinant canine coronavirus with a distinct receptor-binding (S1) domain. Regan AD, et al. Virology 2012 Sep 1
Spike protein fusion peptide and feline coronavirus virulence. Chang HW, et al. Emerg Infect Dis 2012 Jul
Genomic analysis of 16 Colorado human NL63 coronaviruses identifies a new genotype, high sequence diversity in the N-terminal domain of the spike gene and evidence of recombination. Dominguez SR, et al. J Gen Virol 2012 Nov

Representative (genome information for reference and representative genomes)

Reference genome:

SARS coronavirus Tor2

Type	Name	RefSeq	INSDC	Size (Kb)	GC%	Protein	Gene
Chr	Unknown	NC_004718.3	AY274119.3	29.75	40.8	15	13

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