Complete genomes: Retroviridae
NCBI

Important Update

Effective May 2024, the Virus Genomes Resource will no longer be available and will be redirected to NCBI Virus. Learn more.
NCBI links Viral Genomes Home Taxonomy groups All viruses Help Contact us
Viruses   Riboviria   Pararnavirae   Artverviricota   Revtraviricetes   Ortervirales  
  Retroviridae - 91 complete genomes Retrieve sequences:
Orthoretrovirinae  [68] Spumaretrovirinae  [18] unclassified Retroviridae  [5]
* The list view for each taxonomy node shows only the next level of sublineages.
* Unclassified/unassigned names are written in copper

Sort the genomes list by: Host organisms info
Filter by host: 		>Download
Genome Accession RefSeq type Source information Segm Length  Protein  Neighbors Host Created Updated
Go to the top of the page Orthoretrovirinae
    Abelson murine leukemia virus NC_001499 complete - 5894 nt 3  -  vertebrates 01/21/1998 08/13/2018
    Avian carcinoma virus NC_001402 complete strain:MH2E21 - 2630 nt 1  -  04/27/1993 08/13/2018
    Avian leukosis virus
          Avian leukemia virus NC_015116 complete isolate:SCDY1 - 7489 nt 3  219  vertebrates 02/12/2011 08/13/2018
          Avian leukosis virus - RSA NC_001408 complete - 7286 nt 3  219  vertebrates 04/28/1993 08/13/2018
    Avian myeloblastosis virus NC_043404 incomplete - 1928 nt 2  -  vertebrates 06/28/2019 06/28/2019
    Avian myelocytomatosis virus NC_001866 complete - 3392 nt 1  1  vertebrates 01/21/1998 08/13/2018
    Avian sarcoma virus CT10 NC_038922 complete strain:CT10 - 2428 nt 1  -  vertebrates 07/16/1988 08/24/2018
    Baboon endogenous virus strain M7 NC_022517 complete strain:M7 - 8507 nt 3  1  human, vertebrates 11/25/2014 08/13/2018
    Bovine immunodeficiency virus NC_001413 complete isolate:HXB3 - 8482 nt 5  -  vertebrates 04/28/1993 08/13/2018
    Bovine leukemia virus NC_001414 complete - 8419 nt 6  278  human, vertebrates 01/21/1998 08/13/2018
    Bovine retrovirus CH15 NC_029852 complete isolate:CH15 - 7470 nt 4  6  vertebrates 04/11/2016 08/13/2018
    Caprine arthritis encephalitis virus NC_001463 complete - 9189 nt 6  66  vertebrates 08/02/1993 08/13/2018
    Chick syncytial virus NC_043196 incomplete - 1248 nt 1  -  06/28/2019 06/28/2019
    Desmodus rotundus endogenous retrovirus NC_027117 complete isolate:824 - 10485 nt 2  1  vertebrates 05/22/2015 08/13/2018
    Endogenous langur type D retrovirus PO-1-Lu NC_043193 incomplete - 266 nt 1  -  06/28/2019 06/28/2019
    Enzootic nasal tumor virus 2 NC_004994 complete - 7448 nt 4  30  vertebrates 07/08/2003 08/13/2018
    Equine infectious anemia virus NC_001450 complete - 8359 nt 4  35  vertebrates 01/21/1998 08/13/2018
    Feline immunodeficiency virus NC_001482 complete strain:Petaluma - 9474 nt 6  31  vertebrates 08/02/1993 08/13/2018
    Feline leukemia virus NC_001940 complete strain:FRA - 8448 nt 2  21  vertebrates 08/15/1998 08/13/2018
    Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4) NC_038923 incomplete - 2473 nt 1  -  vertebrates 11/18/1986 08/24/2018
    Finkel-Biskis-Jinkins murine sarcoma virus NC_038858 complete - 3811 nt 1  -  vertebrates 08/24/2018 08/24/2018
    Murine leukemia virus
          Friend murine leukemia virus NC_001362 complete strain:FB29 - 8323 nt 3  59  human, vertebrates 10/29/1991 08/13/2018
          Moloney murine leukemia virus NC_001501 complete - 8332 nt 3  59  human, vertebrates 01/21/1998 08/13/2018
          Murine type C retrovirus NC_001702 complete - 8135 nt 2  59  human, vertebrates 12/12/1995 08/13/2018
    Fujinami sarcoma virus NC_001403 complete - 4788 nt 1  1  vertebrates 01/21/1998 08/13/2018
    Gibbon ape leukemia virus NC_001885 complete - 8088 nt 3  5  human, vertebrates 08/02/1993 08/13/2018
    Harvey murine sarcoma virus NC_038668 incomplete - 997 nt 2  -  vertebrates 08/24/2018 08/24/2018
    Primate T-lymphotropic virus 1
          Human T-cell leukemia virus type I NC_001436 complete - 8507 nt 6  300  human, vertebrates 01/21/1998 08/13/2018
          Primate T-lymphotropic virus 1 NC_000858 complete isolate:Tan90 - 9028 nt 4  300  human, vertebrates 06/20/1999 02/01/2022
    Primate T-lymphotropic virus 2
          Human T-lymphotropic virus 2 NC_001488 complete - 8952 nt 5  15  human, vertebrates 08/02/1993 08/13/2018
          Simian T-lymphotropic virus 2 NC_001815 complete strain:PP1664; isolate:STLV-2PP1664 - 8855 nt 7  15  human, vertebrates 04/29/1998 08/13/2018
    Human T-lymphotropic virus 4 NC_011800 complete strain:1863LE - 8791 nt 6  1  human 01/05/2009 08/13/2018
    Human immunodeficiency virus 1 NC_001802 complete - 9181 nt 10  12629  human, vertebrates 01/22/1998 08/13/2018
    Human immunodeficiency virus 2 NC_001722 complete isolate:BEN - 10359 nt 9  72  human 08/02/1993 08/13/2018
    Jaagsiekte sheep retrovirus NC_001494 complete - 7462 nt 5  10  vertebrates 08/02/1993 08/13/2018
    Jembrana disease virus NC_001654 complete strain:Tabanan/87 - 7732 nt 9  -  vertebrates 03/28/1995 06/28/2019
    Kirsten murine sarcoma virus NC_043426 incomplete - 1329 nt 1  -  vertebrates 06/13/1985 06/28/2019
    Koala retrovirus NC_039228 complete - 8431 nt 3  8  vertebrates 08/24/2018 08/24/2018
    Mason-Pfizer monkey virus NC_001550 complete - 8557 nt 4  11  vertebrates 01/21/1998 08/13/2018
    Moloney murine sarcoma virus NC_001502 complete - 5833 nt 4  3  vertebrates 01/21/1998 08/13/2018
    Mouse mammary tumor virus NC_001503 complete - 8805 nt 5  5  human, vertebrates 01/21/1998 08/13/2018
    Murine osteosarcoma virus NC_001506 complete - 3811 nt 2  -  01/21/1998 08/13/2018
    Mus musculus mobilized endogenous polytropic provirus NC_029853 complete - 8183 nt 2  1  vertebrates 04/11/2016 08/13/2018
    Ovine enzootic nasal tumor virus NC_007015 complete isolate:sheep TNO28 - 7434 nt 4  11  vertebrates 04/24/1999 08/13/2018
    Ovine lentivirus NC_001511 complete - 9256 nt 6  2  vertebrates 08/02/1993 08/13/2018
    Porcine endogenous retrovirus E NC_003059 complete - 8072 nt -  10  human, vertebrates 08/12/2001 08/13/2018
    PreXMRV-1 NC_007815 complete - 8197 nt 2  10  human, vertebrates 03/16/2006 08/13/2018
    Primate T-lymphotropic virus 3
          Primate T-lymphotropic virus 3 NC_003323 complete isolate:CTO-604 - 8918 nt 5  8  human, vertebrates 12/19/2001 02/01/2022
          Simian T-cell lymphotropic virus 6 NC_011546 complete strain:Cmo8699AB; type:6 - 8913 nt 6  8  vertebrates 11/12/2008 08/13/2018
    Puma lentivirus 14 NC_038669 complete - 9100 nt 4  7  vertebrates 08/24/2018 08/24/2018
    RD114 retrovirus NC_009889 complete isolate:SC3C - 8406 nt 2  1  human 10/05/2007 08/13/2018
    Reticuloendotheliosis virus NC_006934 complete strain:HA9901 - 8295 nt 3  29  vertebrates 04/07/2005 08/13/2018
    Rous sarcoma virus NC_001407 complete - 9392 nt 4  5  vertebrates 01/21/1998 08/13/2018
    Simian immunodeficiency virus
          Simian immunodeficiency virus NC_001549 complete isolate:677 - 9623 nt 6  547  human, vertebrates 08/03/1993 08/13/2018
          Simian immunodeficiency virus SIV-mnd 2 NC_004455 complete isolate:SIVmnd-2 - 9518 nt 8  547  human, vertebrates 12/20/2002 08/13/2018
    Simian retrovirus 4 NC_014474 complete strain:SRV4/TEX/2009/V1 - 8126 nt 4  4  human, vertebrates 09/08/2010 08/13/2018
    Simian retrovirus 8 NC_031326 complete strain:SRV8/SUZ/2012 - 8126 nt 4  3  vertebrates 10/05/2016 08/13/2018
    Snakehead retrovirus NC_001724 complete - 10688 nt 7  -  05/30/1996 08/13/2018
    Snyder-Theilen feline sarcoma virus NC_043382 incomplete - 4901 nt -  -  vertebrates 06/28/2019 06/28/2019
    Spleen focus-forming virus NC_001500 complete sub-species:Friend spleen focus-forming virus - 6296 nt 4  -  vertebrates 08/02/1993 08/13/2018
    Squirrel monkey retrovirus NC_001514 complete strain:HLB - 8785 nt 4  1  vertebrates 08/02/1993 08/13/2018
    UR2 sarcoma virus NC_001618 complete - 3166 nt 2  -  vertebrates 04/27/1993 08/13/2018
    Visna-maedi virus NC_001452 complete strain:kv1772 - 9202 nt 6  9  vertebrates 06/12/1993 08/13/2018
    Walleye dermal sarcoma virus NC_001867 complete - 12708 nt 6  2  vertebrates 01/21/1998 08/13/2018
    Walleye epidermal hyperplasia virus 1 NC_043194 incomplete - 3603 nt 1  -  vertebrates 06/28/2019 06/28/2019
    Walleye epidermal hyperplasia virus 2 NC_043195 incomplete - 3741 nt 1  -  vertebrates 06/28/2019 06/28/2019
    Woolly monkey sarcoma virus NC_009424 complete - 5779 nt 4  1  vertebrates 07/13/1983 08/13/2018
    Y73 sarcoma virus NC_008094 complete strain:PR2257/16 - 5188 nt 1  1  vertebrates 06/07/2006 08/13/2018
Go to the top of the page Spumaretrovirinae
    African green monkey simian foamy virus NC_010820 complete strain:LK-3 - 13111 nt 5  1  vertebrates 06/06/2008 08/13/2018
    Bovine foamy virus NC_001831 complete - 12002 nt 5  35  vertebrates 09/03/1997 08/13/2018
    Brown greater galago prosimian foamy virus NC_039023 complete isolate:PSFVgal - 12118 nt 4  -  vertebrates 08/24/2018 08/24/2018
    Central cimpanzee simian foamy virus NC_039024 complete strain:Pan troglodytes troglodytes; isolate:BAD327 - 13220 nt 5  -  human 08/24/2018 08/24/2018
    Eastern chimpanzee simian foamy virus NC_039025 complete - 11954 nt 5  -  human 08/24/2018 08/24/2018
    Equine foamy virus NC_002201 complete - 12035 nt 5  1  vertebrates 04/20/2000 08/13/2018
    Feline foamy virus NC_039242 complete isolate:FUV - 11700 nt 5  46  vertebrates 01/08/1997 08/24/2018
    Guenon simian foamy virus NC_043445 complete strain:Cercopithecus nictitans; isolate:AG16 - 13072 nt 5  -  human 06/28/2019 06/28/2019
    Japanese macaque simian foamy virus NC_039026 complete - 12957 nt 5  -  vertebrates 08/24/2018 08/24/2018
    Puma feline foamy virus NC_039022 complete isolate:FFVpc-X102 - 11649 nt 5  -  vertebrates 08/24/2018 08/24/2018
    Rhesus macaque simian foamy virus NC_039238 complete isolate:SFVmmu_K3T - 12983 nt 5  -  vertebrates 08/24/2018 08/24/2018
    Simian foamy virus NC_001364 complete - 13246 nt 6  -  human, vertebrates 07/05/1994 08/13/2018
    Simian foamy virus Pongo pygmaeus pygmaeus NC_039085 complete strain:SFVora; isolate:bella - 12823 nt 5  -  vertebrates 07/15/2003 08/24/2018
    Spider monkey simian foamy virus NC_039027 complete strain:ATCC VR-940 - 12212 nt 5  -  08/24/2018 08/24/2018
    Squirrel monkey simian foamy virus NC_039028 complete strain:ATCC VR-643; serotype:SFV4; isolate:1224; culture-collection:ATCC:VR-643 - 11684 nt 5  -  vertebrates 08/24/2018 08/24/2018
    Western lowland gorilla simian foamy virus NC_039029 complete - 12258 nt 6  -  vertebrates 08/24/2018 08/24/2018
    White-tufted-ear marmoset simian foamy virus NC_039030 complete isolate:SFVmar - 11744 nt 5  -  08/24/2018 08/24/2018
    Yellow-breasted capuchin simian foamy virus NC_039031 complete isolate:Z17 - 11764 nt 5  -  vertebrates 08/24/2018 08/24/2018
Go to the top of the page unclassified Retroviridae
    Atlantic salmon swim bladder sarcoma virus NC_007654 complete - 10305 nt 3  -  vertebrates 12/19/2005 08/13/2018
    Avian endogenous retrovirus EAV-HP NC_005947 complete - 4302 nt 1  6  vertebrates 10/11/1999 08/13/2018
    Citrus endogenous pararetrovirus NC_023153 complete - 6996 nt 2  2  12/23/2013 08/13/2018
    Human endogenous retrovirus K113 NC_022518 complete - 9472 nt 1  1  human 09/30/2013 08/13/2018
    Xenopus laevis endogenous retrovirus Xen1 NC_010955 complete isolate:Xen1 - 10207 nt 2  -  vertebrates 12/23/2002 08/13/2018
  | Disclaimer | Privacy statement |
NCBI Home NCBI Search NCBI SiteMap