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Series GSE188591 Query DataSets for GSE188591
Status Public on Dec 29, 2021
Title Persistent Cryptosporidium parvum infection leads to the development of tumor microenvironment in an experimental mouse model: Results of a microarray approach
Organism Mus musculus
Experiment type Expression profiling by array
Summary Cryptosporidium parvum has been reported to induce digestive adenocarcinoma in a rodent model of chronic cryptosporidiosis. In the current study, the transcriptomes of C. parvum infected ileo-caecal regions of mice developing tumours were analysed to identifie potential genes involved in development of cancer
 
Overall design Whole genome microarray profiling was performed on the C. parvum infected caecum tissue at days 45 and 93 post-infection. The experimental setup consisted of total 15 mice wherein each mouse was considered as an independent experiment. (4 uninfected and 3 infected mice at day 45 post-infection ; 3 uninfected and 5 infected at 93 post-infection)
 
Contributor(s) Viscogliosi E, Certad G, Hot D, Sawant M
Citation(s) 34946170
Submission date Nov 10, 2021
Last update date Dec 30, 2021
Contact name David Hot
E-mail(s) david.hot@pasteur-lille.fr
Organization name Institut Pasteur de Lille
Department Center for Infection and Immunity of Lille
Lab Transcriptomics and Applied Genomics
Street address 1 rue du professeur Calmette
City Lille
ZIP/Postal code 59000
Country France
 
Platforms (1)
GPL21810 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray [Feature Number version]
Samples (14)
GSM5686437 Tm 45-1
GSM5686438 Tm 45-2
GSM5686439 Tm 45-3
Relations
BioProject PRJNA779477

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188591_RAW.tar 175.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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