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Platform GPL10122 Query DataSets for GPL10122
Status Public on Feb 17, 2011
Title Homo sapiens microRNA profiling platform version 4
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Homo sapiens
Manufacturer Luminex
Manufacture protocol Luminex xMap beads were coupled with animo-labeled antisense oligonucleotides to microRNAs
 
Description Capture oligonucleotides were crosslinked to uniquely-colored Luminex xMap beads, which serve as discriminators of probe identity
This set includes 358 oligonucleotides, designed based on rfam ver.7.0
 
Submission date Mar 02, 2010
Last update date Feb 17, 2011
Contact name Yujin Hoshida
E-mail(s) Yujin.Hoshida@UTSouthwestern.edu
Organization name University of Texas Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Samples (108) GSM517193, GSM517194, GSM517195, GSM517196, GSM517197, GSM517198 
Series (3)
GSE20594 microRNA profiling of human hepatocellular carcinoma
GSE20596 MicroRNA-Based Classification of Hepatocellular Carcinoma and Oncogenic Role of miR-517a
GSE31383 microRNA profiling of human healthy liver and hepatocellular carcinoma

Data table header descriptions
ID Probe ID
Description
miRNA_LIST
R_HUMAN
R_MOUSE
miRBASE_ID
SEQUENCE

Data table
ID Description miRNA_LIST R_HUMAN R_MOUSE miRBASE_ID SEQUENCE
EAM312 h-miR-105_rfam7.0 hsa-miR-105 hsa-miR-105_rfam14 MIMAT0000102
EAM186 h-miR-106a_rfam7.0 hsa-miR-106a hsa-miR-106a_rfam14 MIMAT0000103
EAM190 h-miR-10b_rfam7.0 hsa-mmu-miR-10b hsa-mmu-miR-10b_rfam14 MIMAT0000254
JLA138 h-miR-146b_rfam7.0 hsa-miR-146b-5p, mmu-miR-146b hsa-miR-146b-5p mmu-miR-146b_rfam14 MIMAT0002809
EAM316 h-miR-147_rfam7.0 hsa-miR-147 hsa-miR-147_rfam14 MIMAT0000251
EAM403 h-miR-151_rfam7.0 hsa-miR-151-3p hsa-miR-151-3p_rfam14 MIMAT0000757
JLA199 h-miR-154*_rfam7.0 hairpin-hsa-mir-154, hairpin-mmu-mir-154 hairpin-hsa-mir-154 hairpin-mmu-mir-154_rfam14 MI0000480
EAM317 h-miR-155_rfam7.0 hsa-miR-155 hsa-miR-155_rfam14 MIMAT0000646
EAM318 h-miR-17-3p_rfam7.0 hairpin-hsa-mir-17 hairpin-hsa-mir-17_rfam14 MI0000071
JLA148 h-miR-181d_rfam7.0 hsa-mmu-miR-181d hsa-mmu-miR-181d_rfam14 MIMAT0002821
EAM319 h-miR-182*_rfam7.0 hairpin-hsa-mir-182, hairpin-mmu-mir-182 hairpin-hsa-mir-182 hairpin-mmu-mir-182_rfam14 MI0000272
JLA124 h-miR-18b_rfam7.0 hsa-miR-18b hsa-miR-18b_rfam14 MIMAT0001412
JLA198 h-miR-191*_rfam7.0 hairpin-hsa-mir-191 hairpin-hsa-mir-191_rfam14 MI0000465
JLA146 h-miR-193b_rfam7.0 hsa-miR-193b hsa-miR-193b_rfam14 MIMAT0002819
EAM300 h-miR-197_rfam7.0 hsa-mmu-miR-197 hsa-mmu-miR-197_rfam14 MIMAT0000227
EAM301 h-miR-198_rfam7.0 hsa-miR-198 hsa-miR-198_rfam14 MIMAT0000228
EAM235 h-miR-199b_rfam7.0 hsa-miR-199b-5p hsa-miR-199b-5p_rfam14 MIMAT0000263
JLA195 h-miR-200a*_rfam7.0 hairpin-hsa-mir-200a, hairpin-mmu-mir-200a hairpin-hsa-mir-200a hairpin-mmu-mir-200a_rfam14 MI0000737
JLA139 h-miR-202*_rfam7.0 mmu-miR-202-5p, hairpin-hsa-mir-202 hairpin-hsa-mir-202_rfam14 mmu-miR-202-5p MI0003130
JLA140 h-miR-202_rfam7.0 hsa-miR-202 hsa-miR-202_rfam14 MIMAT0002811

Total number of rows: 358

Table truncated, full table size 29 Kbytes.




Download family Format
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Supplementary data files not provided

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