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Platform GPL10483 Query DataSets for GPL10483
Status Public on Jun 12, 2010
Title Human Meth 2.1M WG-T 8-10 [0701_HG18_TILE_08_HX1]
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
Manufacture protocol see manufacturer's web site
 
 
Contributor(s) Sharp AJ, Migliavacca E, Stathaki E, Antonarakis SE
Submission date Jun 04, 2010
Last update date Sep 06, 2011
Contact name Andrew J Sharp
E-mail(s) andrew.sharp@mssm.edu
Organization name Mount Sinai School of Medicine
Department Genetics and Genomic Sciences
Street address 1425 Madison Avenue
City New York
State/province NY
ZIP/Postal code NY 10029
Country USA
 
Samples (12) GSM552432, GSM552433, GSM552434, GSM552435, GSM552436, GSM552437 
Series (1)
GSE22188 Methylation profiling in individuals with uniparental disomy identifies novel differentially methylated regions on chromosome 15

Data table header descriptions
ID
chr chromosome
RANGE_GB Accession Version for HG18
RANGE_START probe start position
RANGE_END probe end position
SEQUENCE sequence

Data table
ID chr RANGE_GB RANGE_START RANGE_END SEQUENCE
CHR12P121385901 CHR12 NC_000012.10 121385901 121385950 TTGTCCTAAGATATACGGAAGGATACTCTAACTTAGGGGGAAAAAAAAAA
CHR12P121386319 CHR12 NC_000012.10 121386319 121386380 AAGATCACACACGTTAATTCACACTGTTAATAGCACAGAAGTGTAATGAACAGCGAAGAGGA
CHR12P121386414 CHR12 NC_000012.10 121386414 121386463 CGTGGCACATATACCTCGTCTAGTTTCTCCATAAGCCTCTGGCTTTTCTT
CHR12P121386504 CHR12 NC_000012.10 121386504 121386553 GTATCAGCCTTGTTTAAACTCGGGTTTTCAGTGCAGGAGGCAAGTAGGAA
CHR12P121386619 CHR12 NC_000012.10 121386619 121386671 AAACATATAAAAGGGAAGGTAATTTTCTGAGATGGAATAAACTGAGTTAGATT
CHR12P121386709 CHR12 NC_000012.10 121386709 121386758 CTCGCCAACAGAGGGCGCCTACGGCCCAGTACAGCTACTGCCCTGATAAT
CHR12P121386804 CHR12 NC_000012.10 121386804 121386858 TGAAACCTAACTGTGTTCGATGTATAACTTGGAAGGGCTCTGTGTTTAGTAAAAC
CHR12P121387013 CHR12 NC_000012.10 121387013 121387069 CAAGTTGAATCAACACTTAGAAAGAGAAAGGAAACAGCTACAATATTTCTTACTGGA
CHR12P121387103 CHR12 NC_000012.10 121387103 121387157 TGAGATTCAGATTCCCAACAGGTACTTACCAAAATCTGAAGTTCTTTTTCCAAAG
CHR12P121387223 CHR12 NC_000012.10 121387223 121387273 TGGAGCTCTCTGGTAATGCTACTAGCCTAACACACAGTGTTACATGGTATA
CHR12P121387325 CHR12 NC_000012.10 121387325 121387376 CAAATGTAAAAAACTTATGAGAAACATAAAACAAAACTGAAAGGAATACAAA
CHR12P121387405 CHR12 NC_000012.10 121387405 121387464 TCAATGACTTTTCAAACAATCAGTTCTATGATATGATTTCCTAATGGCTATTTTTGTGTT
CHR12P121388006 CHR12 NC_000012.10 121388006 121388056 CTCAAACTCCTAGACCCAAGCAATCCTCTTATTTTGGACTCTCAAAGTGCT
CHR12P121388126 CHR12 NC_000012.10 121388126 121388188 ACTTCATTGTAACTTGGAGTATCAGCATGATCTAAAGCAGAAGGTGTGGATGCTTACTTTCTA
CHR12P121388201 CHR12 NC_000012.10 121388201 121388250 GAGCAATTTCATTTCCTAGACTTTAAAAACCTTGGCTGGTCACGGTGGCT
CHR12P121388825 CHR12 NC_000012.10 121388825 121388879 AAAACAAAAACCTTAAGATGCGAATATATGTGGTCTACATTATTTTCTCTATTTG
CHR12P121388915 CHR12 NC_000012.10 121388915 121388964 ATTTAAAAATCCACTGGACAGGCAAGGTGCAGTGGCTGAAGCCTATAATC
CHR12P121389405 CHR12 NC_000012.10 121389405 121389462 TGTCATCTTCGACTATGGTTAGTTAGCAATTTTTTGCTGTTTGTCAGTCCTCACCTCA
CHR12P121389520 CHR12 NC_000012.10 121389520 121389570 AAAAGTTCAGAACATTGAGCATCAATACCAGTGCCTCAACTAGTGGCAGGA
CHR12P121389625 CHR12 NC_000012.10 121389625 121389677 CTAGTTAGTAAGGAATGCAGCTGGCGAATGTTTCACGTAATTTCCTAAGCCTT

Total number of rows: 2173668

Table truncated, full table size 229374 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL10483_0701_HG18_TILE_08_HX1.ndf.gz 116.5 Mb (ftp)(http) NDF
GPL10483_0701_HG18_TILE_08_HX1.pos.gz 16.5 Mb (ftp)(http) POS

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