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Platform GPL1221 Query DataSets for GPL1221
Status Public on Nov 24, 2004
Title BPL_array_NIAS
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Bos taurus
 
Description BPL_array_NIAS platform of a spotted cDNA microarray has been established using a bovine utero-placenta cDNA library. The array has been fabricated collaboratively by Laboratory of Reproductive Biology and Technology at National Institute of Agrobiological Sciences, Tsukuba City, Japan and Department of Paediatric Pharmacology at National Institute of Child Health and Development, Tokyo, Japan.
Keywords = bovine utero-placenta
Keywords = cDNA array
Keywords = gene expression
 
Web link http://www.rbej.com/content/2/1/77
Contributor(s) Ushizawa K, Herath CB, Ishiwata H, Katsuma S, Kizaki K, Shiojima S, Hirasawa A, Takahashi T, Imai K, Izaike Y, Tsujimoto G, Hashizume K
Citation(s) 12658628
Submission date May 07, 2004
Last update date May 26, 2005
Contact name Koichi Ushizawa
E-mail(s) ushizawa@affrc.go.jp
Phone +81-29-838-8633
Fax +81-29-838-8606
Organization name National Institute of Agrobiological Sciences
Department Animal Science Department
Lab Reproductive Biology Unit
Street address Ikenodai 2
City Tsukuba City
State/province Ibaraki
ZIP/Postal code 305-8602
Country Japan
 
Samples (29) GSM23324, GSM23325, GSM23326, GSM23327, GSM23328, GSM23329 
Series (2)
GSE1414 Gene expression of bovine embryo
GSE7096 cDNA microarray data of bovine placenta

Data table header descriptions
ID
CLONE ID Bacterial clone identification numbers from bovine utero-placenta cDNA library
GB_ACC GenBank accession number;
CLUSTER_ID Spotted clones/sequences were clustered on the basis of similarity of their 5`-end and 3`-end sequences
SPOT_ID Column added by GEO staff to facilitate sequence tracking in Entrez GEO

Data table
ID CLONE ID GB_ACC CLUSTER_ID SPOT_ID
3028 BPL11710 AA004223 C34100729
472 BPL12850 AA039438 C34100730
1756 BPL11145 AA069680 C34100731
753 BPL10860 AA092643 C34100732
1123 BPL10408 AA099259 C34100733
292 BPL13066 AA112300 C34100734
3644 BPL13897 AA157075 C34100735
921 BPL10260 AA157933 C34100736
1535 BPL12535 AA165403 C34100737
1794 BPL11117 AA188595 C34100738
751 BPL10864 AA261681 C34100739
2977 BPL11092 AA315083 C34100740
1749 BPL11435 AA320749 C34100741
1734 BPL11909 AA332903 C34100742
810 BPL11286 AA417590 C34100743
653 BPL11864 AA419597 C34100744
3054 BPL10938 AA425975 C34100745
2799 BPL12072 AA446434 C34100746
1273 BPL13767 AA453356 C34100747
406 BPL12898 AA459491 C34100748

Total number of rows: 4608

Table truncated, full table size 142 Kbytes.






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