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Platform GPL1295 Query DataSets for GPL1295
Status Public on Jun 18, 2004
Title Hitachisoft AceGene Human Oligo Chip 30K Subset C
Technology type spotted oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Hitachisoft
Manufacture protocol see manufacturer's web site
 
Description Hitachisoft AceGene Human Oligo Chip 30K Subset C
 
Web link http://hitachisoft.jp/dnasis/ex_acegene/
Submission date Jun 16, 2004
Last update date Jan 18, 2013
Organization Hitachi Software Engineering Co., Ltd.
E-mail(s) dnachip@hitachisoft.jp
Phone +81-45-500-5111
Street address
City 1-1-43,Suehiro-cho,Tsurumi-ku,Yokohama
ZIP/Postal code 230-0045
Country Japan
 
Samples (7) GSM76912, GSM76913, GSM76914, GSM76915, GSM76916, GSM76917 
Series (1)
GSE3408 Novel Roles of Osteopontin and CXC Chemokine Ligand 7 in the Defense against Mycobacterial Infection

Data table header descriptions
ID
Description Description of the probe
CDS_ID Aceesion number of corresponding public database (In the case of GenBank and RefSeq, the position of the CDS within the record is shown after an underscore)
GB_ACC GenBank accession number
Entrez Gene ID Entrez Gene ID
Symbol Symbol of the gene derived from Entrez Gene ID
GeneName Gene Name derived from Entrez Gene ID
IPI ID IPI ID derived from Entrez Gene ID
GO Molecular Function GO Molecular Function derived from Entrez Gene ID
GO Biological Process GO Biological Process derived from Entrez Gene ID
GO Cellular Component GO Cellular Component derived from Entrez Gene ID
ORF open reading frame
SPOT_ID spot identifier

Data table
ID Description CDS_ID GB_ACC Entrez Gene ID Symbol GeneName IPI ID GO Molecular Function GO Biological Process GO Cellular Component ORF SPOT_ID
AGhsC010101 Quality Check Control 01 --Quality Check Control 01
AGhsC010102 u-snrnp-associated cyclophilin; usa-cyp AF016371_1 AF016371 10465 PPIH peptidylprolyl isomerase H (cyclophilin H) IPI00007346.1, IPI00643915.1, IPI00644363.1, IPI00645020.1, IPI00645494.1 cyclosporin A binding, isomerase activity, peptidyl-prolyl cis-trans isomerase activity protein complex assembly, snRNP protein import into nucleus, protein folding, RNA splicing, mRNA processing spliceosome, nucleus PPIH
AGhsC010103 immunoglobulin heavy chain variable region; vh4 AF013616_1 AF013616
AGhsC010104 intestinal mucin; muc3 AF007191_1 AF007191
AGhsC010105 jagged2; jag2 AF029778_1 AF029778 3714 JAG2 jagged 2 IPI00032416.7, IPI00221383.2 calcium ion binding, protein binding, Notch binding, growth factor activity regulation of cell migration, regulation of cell proliferation, thymic T cell selection, T cell differentiation, cell-cell signaling, Notch signaling pathway, cell cycle, auditory receptor cell fate commitment, cell fate determination, cell differentiation, embryonic limb morphogenesis, multicellular organismal development, sensory perception of sound, spermatogenesis integral to plasma membrane, membrane JAG2
AGhsC010106 similar to und313 (s. cervisiae); AE006467_2 AE006467 115939 C16orf42 chromosome 16 open reading frame 42 IPI00011693.4 integral to membrane, membrane C16orf42
AGhsC010107 similar to c. elegans protein f17c8.5; jfp6 AE006464_11 AE006464 339123 hypothetical LOC339123 IPI00045473.1
AGhsC010108 unknown AC007375_1 AC007375 57156 TMEM63C transmembrane protein 63C IPI00067744.7 integral to membrane, membrane TMEM63C
AGhsC010109 diacylglycerol kinase beta; wugsc:h_gs120k09.1 AC006150_1 AC006150 1607 DGKB diacylglycerol kinase, beta 90kDa IPI00002590.2, IPI00374141.2 calcium ion binding, zinc ion binding, diacylglycerol binding, protein binding, transferase activity, diacylglycerol kinase activity protein kinase C activation, intracellular signaling cascade plasma membrane DGKB
AGhsC010110 ensembl prediction ENSG00000130332 --ensembl prediction_ENSG00000130332
AGhsC010111 wugsc:h_dj0870f17.1 AC004911_1 AC004911
AGhsC010112 r32184_3 AC004528_3 AC004528 91304 C19orf6 chromosome 19 open reading frame 6 IPI00386199.2, IPI00396541.1, IPI00749370.1, IPI00816758.1 integral to membrane, membrane C19orf6
AGhsC010113 ensembl prediction ENSG00000122966 11113 CIT citron (rho-interacting, serine/threonine kinase 21) IPI00022465.3, IPI00514476.1, IPI00607850.1, IPI00719285.1, IPI00793453.1, IPI00793478.1 zinc ion binding, metal ion binding, diacylglycerol binding, nucleotide binding, ATP binding, transferase activity, protein serine/threonine kinase activity, small GTPase regulator activity intracellular signaling cascade, cell cycle, mitosis, generation of neurons, cell division, cell differentiation, protein amino acid phosphorylation, nervous system development, multicellular organismal development CIT
AGhsC010114 ba207n4.1.3 (novel protein (wugsc:h_2g3a.1 (tr:q99993)) (isoform 3)); ba207n4.2 AL137143_2 AL137143
AGhsC010115 kiaa1862 protein; kiaa1862 AB058765_1 AB058765 84626 KRBA1 KRAB-A domain containing 1 IPI00162207.7, IPI00183331.7 nucleic acid binding regulation of transcription, DNA-dependent intracellular KRBA1
AGhsC010116 kiaa1823 protein; kiaa1823 AB058726_1 AB058726 84295 PHF6 PHD finger protein 6 IPI00395568.1, IPI00397700.5, IPI00552149.1 zinc ion binding, metal ion binding, protein binding regulation of transcription, DNA-dependent, transcription nucleus PHF6
AGhsC010117 Alpha tubulin NM_006082 NM_006082 10376 TUBA1B tubulin, alpha 1b IPI00387144.4, IPI00792677.1, IPI00793930.1 nucleotide binding, GTP binding, GTPase activity, structural molecule activity microtubule-based movement, protein polymerization microtubule, protein complex TUBA1B
AGhsC010118 macgap AB053293_1 AB053293 93663 ARHGAP18 Rho GTPase activating protein 18 IPI00296353.8, IPI00760924.1 protein binding, GTPase activator activity signal transduction intracellular ARHGAP18
AGhsC010119 kiaa1764 protein; kiaa1764 AB051551_1 AB051551 85444 LRRCC1 leucine rich repeat and coiled-coil domain containing 1 IPI00477245.3, IPI00807727.1 protein binding LRRCC1
AGhsC010120 kiaa1737 protein; kiaa1737 AB051524_1 AB051524 85457 KIAA1737 KIAA1737 IPI00412997.1 KIAA1737

Total number of rows: 10368

Table truncated, full table size 1641 Kbytes.






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