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Platform GPL13412 Query DataSets for GPL13412
Status Public on May 11, 2011
Title MM8 promter array 1 and 2
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Nimblegen
Manufacture protocol see Nimblegen
 
 
Submission date Apr 14, 2011
Last update date May 11, 2011
Contact name Kun Qu
E-mail(s) kqu@stanford.edu
Organization name Stanford University
Department Dermatology
Lab Howard Chang
Street address 269 Campus Dr. CCSR 2150
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (16) GSM709636, GSM709637, GSM709638, GSM709639, GSM709640, GSM709641 
Series (4)
GSE28638 Dynamic Chromatin Localization of Sirt6 Shapes Stress- and Aging- Related Transcriptional Networks (ChIP-chip)
GSE28641 Dynamic Chromatin Localization of Sirt6 Shapes Stress- and Aging- Related Transcriptional Networks
GSE171201 ChIP-Chip data from WT E14.5 fetal liver

Data table header descriptions
ID
SEQ_ID
CHROMOSOME
RANGE_GB
RANGE_START
RANGE_END
LENGTH
GB_LIST
SEQUENCE
SPOT_ID

Data table
ID SEQ_ID CHROMOSOME RANGE_GB RANGE_START RANGE_END LENGTH GB_LIST SEQUENCE SPOT_ID
CHR1FS003660829 chr1:3660829-3664829 chr1 NC_000067.4 3660829 3660878 50 NM_001011874 CCCCGGCTGCAGACCCACTGCTGACCACCGTCTTGCAATCTGCTCCAGGC
CHR1FS003660929 chr1:3660829-3664829 chr1 NC_000067.4 3660929 3660978 50 NM_001011874 ATGCACAAACCAGCGGAAGCTGAACACTTGCACAGAAAGGGAGCCCAGCA
CHR1FS003661029 chr1:3660829-3664829 chr1 NC_000067.4 3661029 3661078 50 NM_001011874 TAGTCCACCGCGAGCCAGATGTCCGTTCCCACATCCGCGAAGTACACGGC
CHR1FS003661129 chr1:3660829-3664829 chr1 NC_000067.4 3661129 3661178 50 NM_001011874 CCCTGCCCAGGCGCAGGCACAGCGCCGCAGAGCCCGCCCCGCTGCCCCGG
CHR1FS003661229 chr1:3660829-3664829 chr1 NC_000067.4 3661229 3661278 50 NM_001011874 GCAGCAGCAGCAGCGCGAGCAGCCACCGCCGTCCGGGCAGCAGCCGCCTC
CHR1FS003661329 chr1:3660829-3664829 chr1 NC_000067.4 3661329 3661378 50 NM_001011874 AGTCCTTGCACAGAGCCCGAATTGTCCGAGTTCTGCAGCGGGGTGAACGC
CHR1FS003661429 chr1:3660829-3664829 chr1 NC_000067.4 3661429 3661478 50 NM_001011874 TGATGCCTCGGCAGCGGAGGAGAGCACTCCTTTATCTGACACCTGTCCCT
CHR1FS003661529 chr1:3660829-3664829 chr1 NC_000067.4 3661529 3661578 50 NM_001011874 GGCCGCGCCGCTCCCCAGCTCCTACTCCAGCGCCCGCTCGCCCGCCGCCG
CHR1FS003661629 chr1:3660829-3664829 chr1 NC_000067.4 3661629 3661678 50 NM_001011874 GGAGCGCCGCCTGGCTGCCTGCGCCGAGCCCAGCTGCTCGCGCCGGCCCG
CHR1FS003661829 chr1:3660829-3664829 chr1 NC_000067.4 3661829 3661878 50 NM_001011874 CTCCTCCCGCAGCCTCTCCTCCACCAGCTGACTCCGAGGGAGAGGATGAC
CHR1FS003661929 chr1:3660829-3664829 chr1 NC_000067.4 3661929 3661978 50 NM_001011874 GCGAGAAGGAGGGCCCGGAGGAGGGGCTGGGATTGAGGGGAGCGGCGGGT
CHR1FS003662029 chr1:3660829-3664829 chr1 NC_000067.4 3662029 3662078 50 NM_001011874 TCGGAGGCCCAGTCCAGGCTCGTGGGATAGCGAAGAGCGTTGAGTGGATT
CHR1FS003662129 chr1:3660829-3664829 chr1 NC_000067.4 3662129 3662178 50 NM_001011874 CTTGGTGTTGGGTCACTGCCGAGGGTAGGGGGCCACGGACACAAGCGGGC
CHR1FS003662229 chr1:3660829-3664829 chr1 NC_000067.4 3662229 3662278 50 NM_001011874 GCGCGCTCGGCACCTGGCTGGGTGTGGTATGGTGCTAGGTGTGTTGCTGG
CHR1FS003662329 chr1:3660829-3664829 chr1 NC_000067.4 3662329 3662378 50 NM_001011874 GGTGGTGGGCGTGCCATGCTTTGGAGATCCTGGGTGGCACAGTACTTGCA
CHR1FS003662429 chr1:3660829-3664829 chr1 NC_000067.4 3662429 3662478 50 NM_001011874 TAAGGCGAGAGCAGCCCCAGGGATGCTGTCCTGCCAAACCCCAGCCTAGA
CHR1FS003662529 chr1:3660829-3664829 chr1 NC_000067.4 3662529 3662578 50 NM_001011874 CTGCGAGTTTAACGAGCCTGAGGCAGCAGCACTAGGCAGACACCATGGTG
CHR1FS003662629 chr1:3660829-3664829 chr1 NC_000067.4 3662629 3662678 50 NM_001011874 CCTAGAGCGCGGCGGTGGGAGGAGGGACATGGCTAGTAACCAGGGAAAAG
CHR1FS003662729 chr1:3660829-3664829 chr1 NC_000067.4 3662729 3662782 54 NM_001011874 TAATGCCACTTCTCTTATTCCAAAACTGCAATTACCTTCCCTTAAACCTATAAA
CHR1FS003662829 chr1:3660829-3664829 chr1 NC_000067.4 3662829 3662883 55 NM_001011874 TTTAATCTATTCTCGAAGAGAATGTAATAAAATATGTTGCAGTTTAAAAAACAAA

Total number of rows: 770808

Table truncated, full table size 118242 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL13412_2006-07-18_MM8_promoter_1of2.gff.gz 1.4 Mb (ftp)(http) GFF
GPL13412_2006-07-18_MM8_promoter_1of2.ndf.gz 23.9 Mb (ftp)(http) NDF
GPL13412_2006-07-18_MM8_promoter_1of2.ngd.gz 269.7 Kb (ftp)(http) NGD
GPL13412_2006-07-18_MM8_promoter_1of2.pos.gz 2.9 Mb (ftp)(http) POS
GPL13412_2006-07-18_MM8_promoter_2of2.gff.gz 1.4 Mb (ftp)(http) GFF
GPL13412_2006-07-18_MM8_promoter_2of2.ngd.gz 271.1 Kb (ftp)(http) NGD
GPL13412_2006-07-18_MM8_promoter_2of2.pos.gz 2.9 Mb (ftp)(http) POS

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