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Platform GPL13667 Query DataSets for GPL13667
Status Public on May 31, 2011
Title [HG-U219] Affymetrix Human Genome U219 Array
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's website
 
 
Submission date May 31, 2011
Last update date Mar 21, 2019
Organization Affymetrix, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (13599) GSM747238, GSM747239, GSM747240, GSM747241, GSM747242, GSM747243 
Series (188)
GSE25504 Whole blood mRNA expression profiling of host molecular networks in neonatal sepsis
GSE30183 Expression profiling of MCF7 cells upon nutlin3a treatment
GSE30211 Gene expression changes during Type 1 diabetes pathogenesis
Relations
Alternative to GPL15803 ([Alternative ENSG Brainarray CDF Version 14.1.0])
Alternative to GPL18189 (Alternative CDF [HGU219_Hs_ENTREZG_15.1.0])
Alternative to GPL19099 (alternative)
Alternative to GPL19100 (alternative)
Alternative to GPL19211 (Alternative CDF [HGU219_Hs_ENSG_17.1.0])
Alternative to GPL19833 (Alternative CDF [HGU219_Hs_ENSG_18.0.0])
Alternative to GPL20650 (Alternative CDF [HG-U219_Hs_ENTREZG_18])
Alternative to GPL21464 (Alternative CDF [HGU219_Hs_ENTREZG_19.0.0])
Alternative to GPL24030 (Alternative CDF [HGU219_Hs_ENTREZG_20.0.0])
Alternative to GPL24052 (Alternative CDF)

Data table header descriptions
ID
GeneChip Array
Species Scientific Name
Annotation Date
Sequence Type
Sequence Source
Transcript ID(Array Design)
Target Description
Representative Public ID
Archival UniGene Cluster
UniGene ID
Genome Version
Alignments
Gene Title
Gene Symbol
Chromosomal Location
GB_LIST GenBank accession numbers
SPOT_ID
Unigene Cluster Type
Ensembl
Entrez Gene
SwissProt
EC
OMIM
RefSeq Protein ID
RefSeq Transcript ID
FlyBase
AGI
WormBase
MGI Name
RGD Name
SGD accession number
Gene Ontology Biological Process
Gene Ontology Cellular Component
Gene Ontology Molecular Function
Pathway
InterPro
Trans Membrane
QTL
Annotation Description
Annotation Transcript Cluster
Transcript Assignments
Annotation Notes

Data table
ID GeneChip Array Species Scientific Name Annotation Date Sequence Type Sequence Source Transcript ID(Array Design) Target Description Representative Public ID Archival UniGene Cluster UniGene ID Genome Version Alignments Gene Title Gene Symbol Chromosomal Location GB_LIST SPOT_ID Unigene Cluster Type Ensembl Entrez Gene SwissProt EC OMIM RefSeq Protein ID RefSeq Transcript ID FlyBase AGI WormBase MGI Name RGD Name SGD accession number Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function Pathway InterPro Trans Membrane QTL Annotation Description Annotation Transcript Cluster Transcript Assignments Annotation Notes
11715100_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21264570 g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens g21264570 --- Hs.247813 February 2009 (Genome Reference Consortium GRCh37) chr6:26271145-26271612 (-) // 100.0 // p22.2 histone cluster 1, H3g HIST1H3G chr6p21.3 NM_003534 full length --- 8355 P68431 --- 602815 NP_003525 NM_003534 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A NM_003534(11) NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // --- BC079835 // gb_htc // 6 // Cross Hyb Matching Probes
11715101_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21264570 g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens g21264570 --- Hs.247813 February 2009 (Genome Reference Consortium GRCh37) chr6:26271145-26271612 (-) // 100.0 // p22.2 histone cluster 1, H3g HIST1H3G chr6p21.3 NM_003534 full length ENSG00000178458 8355 P68431 --- 602815 NP_003525 NM_003534 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A BC079835(11),NM_003534(11) BC079835 // Homo sapiens histone cluster 1, H3g, mRNA (cDNA clone IMAGE:5935692). // gb_htc // 11 // --- /// ENST00000321285 // cdna:known chromosome:GRCh37:6:26271202:26271612:-1 gene:ENSG00000178458 // ensembl // 11 // --- /// GENSCAN00000044911 // cdna:Genscan chromosome:GRCh37:6:26271202:26271612:-1 // ensembl // 11 // --- /// NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // --- ---
11715102_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21264570 g21264570 /TID=g21264570 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264570 /REP_ORG=Homo sapiens g21264570 --- Hs.247813 February 2009 (Genome Reference Consortium GRCh37) chr6:26271145-26271612 (-) // 100.0 // p22.2 histone cluster 1, H3g HIST1H3G chr6p21.3 NM_003534 full length --- 8355 P68431 --- 602815 NP_003525 NM_003534 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A NM_003534(11) NM_003534 // Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA. // refseq // 11 // --- GENSCAN00000044911 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000321285 // ensembl // 4 // Cross Hyb Matching Probes /// BC079835 // gb_htc // 7 // Cross Hyb Matching Probes
11715103_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g22748780 g22748780 /TID=g22748780 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g22748780 /REP_ORG=Homo sapiens g22748780 --- Hs.465643 February 2009 (Genome Reference Consortium GRCh37) chr19:4639529-5145579 (+) // 48.53 // p13.3 tumor necrosis factor, alpha-induced protein 8-like 1 TNFAIP8L1 chr19p13.3 NM_001167942, NM_152362 full length ENSG00000185361 126282 Q8WVP5 --- --- NP_001161414 /// NP_689575 NM_001167942 /// NM_152362 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A BC017672(11),BC044250(9),ENST00000327473(11),NM_001167942(11),NM_152362(11) BC017672 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1, mRNA (cDNA clone MGC:17791 IMAGE:3885999), complete cds. // gb // 11 // --- /// BC044250 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1, mRNA (cDNA clone IMAGE:5784807). // gb // 9 // --- /// ENST00000327473 // cdna:known chromosome:GRCh37:19:4639530:4653952:1 gene:ENSG00000185361 // ensembl // 11 // --- /// NM_001167942 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1 (TNFAIP8L1), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152362 // Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1 (TNFAIP8L1), transcript variant 2, mRNA. // refseq // 11 // --- ---
11715104_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g30039713 g30039713 /TID=g30039713 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g30039713 /REP_ORG=Homo sapiens g30039713 --- Hs.352515 February 2009 (Genome Reference Consortium GRCh37) chr17:72920369-72929640 (+) // 100.0 // q25.1 otopetrin 2 OTOP2 chr17q25.1 NM_178160 full length ENSG00000183034 92736 Q7RTS6 --- 607827 NP_835454 NM_178160 --- --- --- --- --- --- --- 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation --- --- IPR004878 // Protein of unknown function DUF270 // 1.0E-6 /// IPR004878 // Protein of unknown function DUF270 // 1.0E-13 NP_835454.1 // span:30-52,62-81,101-120,135-157,240-262,288-310,327-349,369-391,496-515,525-547 // numtm:10 --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 3 transcripts. // false // Matching Probes // A ENST00000331427(11),ENST00000426069(11),NM_178160(11) ENST00000331427 // cdna:known chromosome:GRCh37:17:72920370:72929640:1 gene:ENSG00000183034 // ensembl // 11 // --- /// ENST00000426069 // cdna:known chromosome:GRCh37:17:72920370:72929640:1 gene:ENSG00000183034 // ensembl // 11 // --- /// NM_178160 // Homo sapiens otopetrin 2 (OTOP2), mRNA. // refseq // 11 // --- GENSCAN00000031612 // ensembl // 8 // Cross Hyb Matching Probes
11715105_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g45580703 g45580703 /TID=g45580703 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g45580703 /REP_ORG=Homo sapiens g45580703 --- Hs.439154 February 2009 (Genome Reference Consortium GRCh37) chr17:35732984-35749660 (+) // 98.15 // q12 chromosome 17 open reading frame 78 C17orf78 chr17q12 NM_173625 full length ENSG00000167230 284099 Q8N4C9 --- --- NP_775896 NM_173625 --- --- --- --- --- --- --- 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation --- --- --- AAH34672.1 // span:184-206 // numtm:1 /// NP_775896.3 // span:184-206 // numtm:1 --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A AK096966(10),BC034672(11),ENST00000300618(11),ENST00000321564(11),NM_173625(11) AK096966 // Homo sapiens cDNA FLJ39647 fis, clone SMINT2004781. // gb // 10 // --- /// BC034672 // Homo sapiens chromosome 17 open reading frame 78, mRNA (cDNA clone MGC:34759 IMAGE:5184947), complete cds. // gb // 11 // --- /// ENST00000300618 // cdna:known chromosome:GRCh37:17:35732985:35749660:1 gene:ENSG00000167230 // ensembl // 11 // --- /// ENST00000321564 // cdna:known chromosome:GRCh37:17:35732985:35749660:1 gene:ENSG00000167230 // ensembl // 11 // --- /// NM_173625 // Homo sapiens chromosome 17 open reading frame 78 (C17orf78), mRNA. // refseq // 11 // --- ---
11715106_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g56847633 g56847633 /TID=g56847633 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g56847633 /REP_ORG=Homo sapiens g56847633 --- Hs.676333 February 2009 (Genome Reference Consortium GRCh37) chr7:143268889-143271244 (+) // 100.0 // q35 /// chr7:143880575-143882930 (+) // 98.34 // q35 /// chr13:75812159-75814497 (-) // 94.18 // q22.2 /// chr2:168570249-168572595 (-) // 94.01 // q24.3 /// chr6:132029823-132032178 (-) // 98.13 // q23.2 /// chr7:143452417-143454772 (-) // 99.75 // q35 /// chr7:143964009-143966364 (-) // 98.56 // q35 CTAGE family, member 6 CTAGE6 chr7q35 NM_178561 full length ENSG00000176227 /// ENSG00000176366 340307 Q86UF2 --- --- NP_848656 NM_178561 --- --- --- --- --- --- --- 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation --- --- --- NP_848656.2 // span:38-60 // numtm:1 --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A BC110410(10),NM_178561(11) BC110410 // Homo sapiens cDNA clone IMAGE:5741961, containing frame-shift errors. // gb_htc // 10 // --- /// ENST00000324143 // cdna:pseudogene chromosome:GRCh37:7:143452418:143454617:-1 gene:ENSG00000176366 // ensembl // 11 // --- /// ENST00000420911 // cdna:pseudogene chromosome:GRCh37:7:143268911:143271320:1 gene:ENSG00000176227 // ensembl // 11 // --- /// ENST00000447022 // cdna:pseudogene chromosome:GRCh37:7:143268819:143271478:1 gene:ENSG00000176227 // ensembl // 11 // --- /// GENSCAN00000026791 // cdna:Genscan chromosome:GRCh37:7:143268911:143271244:1 // ensembl // 11 // --- /// GENSCAN00000047893 // cdna:Genscan chromosome:GRCh37:7:143452418:143454751:-1 // ensembl // 11 // --- /// NM_178561 // Homo sapiens CTAGE family, member 6 (CTAGE6), mRNA. // refseq // 11 // --- GENSCAN00000058144 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000058143 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000037055 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000434925 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000458415 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000314099 // ensembl // 2 // Cross Hyb Matching Probes /// BC146818 // gb // 8 // Cross Hyb Matching Probes /// AK292236 // gb // 2 // Cross Hyb Matching Probes /// AF338232 // gb // 2 // Cross Hyb Matching Probes /// NM_198495 // refseq // 2 // Cross Hyb Matching Probes /// NM_001145659 // refseq // 2 // Cross Hyb Matching Probes
11715107_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g56090587 g56090587 /TID=g56090587 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g56090587 /REP_ORG=Homo sapiens g56090587 --- Hs.533543 February 2009 (Genome Reference Consortium GRCh37) chrX:154611763-154612879 (+) // 93.1 // q28 /// chrX:154114649-154115765 (+) // 93.1 // q28 /// chrX:154687145-154688261 (-) // 93.1 // q28 coagulation factor VIII-associated (intronic transcript) 1 /// coagulation factor VIII-associated (intronic transcript) 2 /// coagulation factor VIII-associated (intronic transcript) 3 F8A1 /// F8A2 /// F8A3 chrXq28 NM_001007523, NM_001007524, NM_012151 full length ENSG00000185990 /// ENSG00000197932 /// ENSG00000198444 474383 /// 474384 /// 8263 P23610 --- 305423 NP_001007524 /// NP_001007525 /// NP_036283 NM_001007523 /// NM_001007524 /// NM_012151 --- --- --- --- --- --- --- 0005634 // nucleus // inferred from direct assay --- Blood_Clotting_Cascade // GenMAPP --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 9 transcripts. // true // Matching Probes // A GENSCAN00000006148(11),GENSCAN00000059136(11),GENSCAN00000003395(11),ENST00000369446(11),ENST00000369505(11),ENST00000369445(11),BC039693(11),BC071963(11),NM_012151(11),NM_001007523(11),NM_001007524(11) BC039693 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1, mRNA (cDNA clone MGC:44976 IMAGE:5214628), complete cds. // gb // 11 // --- /// BC071963 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1, mRNA (cDNA clone MGC:88655 IMAGE:5477018), complete cds. // gb // 11 // --- /// ENST00000369445 // cdna:known chromosome:GRCh37:X:154686576:154688276:-1 gene:ENSG00000185990 // ensembl // 11 // --- /// ENST00000369446 // cdna:known chromosome:GRCh37:X:154114635:154116335:1 gene:ENSG00000197932 // ensembl // 11 // --- /// ENST00000369505 // cdna:known chromosome:GRCh37:X:154611749:154613449:1 gene:ENSG00000198444 // ensembl // 11 // --- /// GENSCAN00000003395 // cdna:Genscan chromosome:GRCh37:X:154114650:154115765:1 // ensembl // 11 // --- /// GENSCAN00000006148 // cdna:Genscan chromosome:GRCh37:X:154687146:154688261:-1 // ensembl // 11 // --- /// GENSCAN00000059136 // cdna:Genscan chromosome:GRCh37:X:154611764:154612879:1 // ensembl // 11 // --- /// NM_001007523 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 2 (F8A2), mRNA. // refseq // 11 // --- /// NM_001007524 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 3 (F8A3), mRNA. // refseq // 11 // --- /// NM_012151 // Homo sapiens coagulation factor VIII-associated (intronic transcript) 1 (F8A1), mRNA. // refseq // 11 // --- ---
11715108_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g148236060 g148236060 /TID=g148236060 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g148236060 /REP_ORG=Homo sapiens g148236060 --- Hs.722466 February 2009 (Genome Reference Consortium GRCh37) chr4:178649906-178911669 (+) // 49.63 // q34.3 hypothetical protein LOC285501 LOC285501 chr4q34.3 NM_001085490, NR_028342 --- --- 285501 --- --- --- NP_001078959 NM_001085490 /// NR_028342 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A BC033326(10),NR_028342(9) BC033326 // Homo sapiens cDNA clone IMAGE:4828874. // gb // 10 // --- /// NR_028342 // Homo sapiens hypothetical protein LOC285501 (LOC285501), non-coding RNA. // refseq // 9 // --- ENST00000431174 // ensembl // 2 // Cross Hyb Matching Probes
11715109_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g141802512 g141802512 /TID=g141802512 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g141802512 /REP_ORG=Homo sapiens g141802512 --- Hs.439922 February 2009 (Genome Reference Consortium GRCh37) chr3:169629481-169656946 (+) // 83.11 // q26.2 sterile alpha motif domain containing 7 SAMD7 chr3q26.2 NM_182610 full length ENSG00000187033 344658 Q7Z3H4 --- --- NP_872416 NM_182610 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A BX537903(11),BX648991(11),ENST00000335556(11),ENST00000428432(11),NM_182610(11) BX537903 // Homo sapiens mRNA; cDNA DKFZp686E1583 (from clone DKFZp686E1583); complete cds. // gb // 11 // --- /// BX648991 // Homo sapiens mRNA; cDNA DKFZp686J0784 (from clone DKFZp686J0784). // gb // 11 // --- /// ENST00000335556 // cdna:known chromosome:GRCh37:3:169629360:169656946:1 gene:ENSG00000187033 // ensembl // 11 // --- /// ENST00000428432 // cdna:known chromosome:GRCh37:3:169629482:169656946:1 gene:ENSG00000187033 // ensembl // 11 // --- /// NM_182610 // Homo sapiens sterile alpha motif domain containing 7 (SAMD7), mRNA. // refseq // 11 // --- ---
11715110_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g122937477 g122937477 /TID=g122937477 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g122937477 /REP_ORG=Homo sapiens g122937477 --- Hs.574574 February 2009 (Genome Reference Consortium GRCh37) chr19:4890448-4902879 (-) // 80.46 // p13.3 arrestin domain containing 5 ARRDC5 chr19p13.3 NM_001080523 full length ENSG00000205784 645432 A6NEK1 --- --- NP_001073992 NM_001080523 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A ENST00000381781(11),NM_001080523(11) ENST00000381781 // cdna:known chromosome:GRCh37:19:4890449:4902879:-1 gene:ENSG00000205784 // ensembl // 11 // --- /// NM_001080523 // Homo sapiens arrestin domain containing 5 (ARRDC5), mRNA. // refseq // 11 // --- ---
11715111_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g146229337 g146229337 /TID=g146229337 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g146229337 /REP_ORG=Homo sapiens g146229337 --- Hs.659014 February 2009 (Genome Reference Consortium GRCh37) chr19:49547094-49548567 (+) // 97.35 // q13.33 /// chr19:49550895-49552368 (-) // 98.01 // q13.33 /// chr19:49526126-49527600 (-) // 97.12 // q13.33 /// chr19:49538826-49559004 (-) // 95.35 // q13.33 chorionic gonadotropin, beta polypeptide /// chorionic gonadotropin, beta polypeptide 1 /// chorionic gonadotropin, beta polypeptide 2 /// chorionic gonadotropin, beta polypeptide 5 /// chorionic gonadotropin, beta polypeptide 7 /// chorionic gonadotropin, beta polypeptide 8 CGB /// CGB1 /// CGB2 /// CGB5 /// CGB7 /// CGB8 chr19q13.32 NM_000737, NM_033043, NM_033142, NM_033183, NM_033377, NM_033378 full length ENSG00000104818 /// ENSG00000104827 /// ENSG00000189052 /// ENSG00000196337 /// ENSG00000204748 /// ENSG00000213030 1082 /// 114335 /// 114336 /// 93659 /// 94027 /// 94115 A6NKQ9 /// B4DNG3 /// P01233 /// Q6NT52 --- 118860 /// 608823 /// 608824 /// 608825 /// 608826 /// 608827 NP_000728 /// NP_149032 /// NP_149133 /// NP_149439 /// NP_203695 /// NP_203696 NM_000737 /// NM_033043 /// NM_033142 /// NM_033183 /// NM_033377 /// NM_033378 --- --- --- --- --- --- 0006915 // apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor protein signaling pathway // not recorded /// 0007267 // cell-cell signaling // traceable author statement /// 0007292 // female gamete generation // traceable author statement 0005576 // extracellular region // not recorded /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement 0005179 // hormone activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement Cell_cycle_KEGG // GenMAPP /// G1_to_S_cell_cycle_Reactome // GenMAPP --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 27 transcripts. // true // Matching Probes // A GENSCAN00000000530(11),GENSCAN00000000522(11),GENSCAN00000000525(11),GENSCAN00000000526(11),GENSCAN00000000532(11),ENST00000448402(11),ENST00000357383(11),ENST00000359342(11),ENST00000301407(11),ENST00000391869(11),ENST00000428927(11),ENST00000301408(11),ENST00000448456(11),ENST00000355414(11),ENST00000356213(11),ENST00000377280(11),BC103969(11),BC103970(11),BC103971(11),BC106059(11),BC106723(11),BC106724(11),BC107144(11),BC128603(11),BT006890(11),J00117(11),AK125108(11),AK291552(11),BC006290(11),BC022796(11),BC030994(11),BC041054(11),BC051378(11),BC069367(10),BC069526(11),NM_000737(11),NM_033378(11),NM_033043(11),NM_033377(11),NM_033183(11),NM_033142(11) AK125108 // Homo sapiens cDNA FLJ43118 fis, clone CTONG3002909, highly similar to CHORIOGONADOTROPIN BETA CHAIN PRECURSOR. // gb // 11 // --- /// AK291552 // Homo sapiens cDNA FLJ78519 complete cds. // gb // 11 // --- /// BC006290 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:10399 IMAGE:3960125), complete cds. // gb // 11 // --- /// BC022796 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:39080 IMAGE:4811294), complete cds. // gb // 11 // --- /// BC030994 // Homo sapiens chorionic gonadotropin, beta polypeptide 8, mRNA (cDNA clone MGC:32699 IMAGE:4605021), complete cds. // gb // 11 // --- /// BC041054 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:52151 IMAGE:5431911), complete cds. // gb // 11 // --- /// BC051378 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:59699 IMAGE:3956670), complete cds. // gb // 11 // --- /// BC069367 // Homo sapiens chorionic gonadotropin, beta polypeptide 2, mRNA (cDNA clone MGC:96947 IMAGE:7262156), complete cds. // gb // 10 // --- /// BC069526 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:96911 IMAGE:7262120), complete cds. // gb // 11 // --- /// BC103969 // Homo sapiens chorionic gonadotropin, beta polypeptide 8, mRNA (cDNA clone MGC:119854 IMAGE:40014676), complete cds. // gb // 11 // --- /// BC103970 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119855 IMAGE:40014677), complete cds. // gb // 11 // --- /// BC103971 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119856 IMAGE:40014679), complete cds. // gb // 11 // --- /// BC106059 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:117343 IMAGE:4992804), complete cds. // gb // 11 // --- /// BC106723 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119822 IMAGE:40014469), complete cds. // gb // 11 // --- /// BC106724 // Homo sapiens chorionic gonadotropin, beta polypeptide 5, mRNA (cDNA clone MGC:119823 IMAGE:40014470), complete cds. // gb // 11 // --- /// BC107144 // Homo sapiens chorionic gonadotropin, beta polypeptide 1, mRNA (cDNA clone IMAGE:40030883). // gb // 11 // --- /// BC128603 // Homo sapiens chorionic gonadotropin, beta polypeptide, mRNA (cDNA clone MGC:158885 IMAGE:40002893), complete cds. // gb // 11 // --- /// BT006890 // Homo sapiens chorionic gonadotropin, beta polypeptide mRNA, complete cds. // gb // 11 // --- /// ENST00000301407 // cdna:known chromosome:GRCh37:19:49538826:49540191:-1 gene:ENSG00000204748 // ensembl // 11 // --- /// ENST00000301408 // cdna:known chromosome:GRCh37:19:49547063:49548566:1 gene:ENSG00000189052 // ensembl // 11 // --- /// ENST00000355414 // cdna:known chromosome:GRCh37:19:49550897:49552400:-1 gene:ENSG00000213030 // ensembl // 11 // --- /// ENST00000356213 // cdna:known chromosome:GRCh37:19:49557548:49559036:-1 gene:ENSG00000196337 // ensembl // 11 // --- /// ENST00000357383 // cdna:known chromosome:GRCh37:19:49526128:49527632:-1 gene:ENSG00000104827 // ensembl // 11 // --- /// ENST00000359342 // cdna:known chromosome:GRCh37:19:49535130:49536495:1 gene:ENSG00000104818 // ensembl // 11 // --- /// ENST00000377280 // cdna:known chromosome:GRCh37:19:49557548:49559036:-1 gene:ENSG00000196337 // ensembl // 11 // --- /// ENST00000391869 // cdna:known chromosome:GRCh37:19:49538828:49540017:-1 gene:ENSG00000204748 // ensembl // 11 // --- /// ENST00000428927 // cdna:known chromosome:GRCh37:19:49547063:49548566:1 gene:ENSG00000189052 // ensembl // 11 // --- /// ENST00000448402 // cdna:known chromosome:GRCh37:19:49526128:49527632:-1 gene:ENSG00000104827 // ensembl // 11 // --- /// ENST00000448456 // cdna:known chromosome:GRCh37:19:49550897:49552400:-1 gene:ENSG00000213030 // ensembl // 11 // --- /// GENSCAN00000000522 // cdna:Genscan chromosome:GRCh37:19:49535698:49536478:1 // ensembl // 11 // --- /// GENSCAN00000000525 // cdna:Genscan chromosome:GRCh37:19:49538867:49539623:-1 // ensembl // 11 // --- /// GENSCAN00000000526 // cdna:Genscan chromosome:GRCh37:19:49545329:49548551:1 // ensembl // 11 // --- /// GENSCAN00000000530 // cdna:Genscan chromosome:GRCh37:19:49526143:49529353:-1 // ensembl // 11 // --- /// GENSCAN00000000532 // cdna:Genscan chromosome:GRCh37:19:49550912:49562024:-1 // ensembl // 11 // --- /// J00117 // Human chorionic gonadotropin (hcg) beta subunit mRNA, complete cds. // gb // 11 // --- /// NM_000737 // Homo sapiens chorionic gonadotropin, beta polypeptide (CGB), mRNA. // refseq // 11 // --- /// NM_033043 // Homo sapiens chorionic gonadotropin, beta polypeptide 5 (CGB5), mRNA. // refseq // 11 // --- /// NM_033142 // Homo sapiens chorionic gonadotropin, beta polypeptide 7 (CGB7), mRNA. // refseq // 11 // --- /// NM_033183 // Homo sapiens chorionic gonadotropin, beta polypeptide 8 (CGB8), mRNA. // refseq // 11 // --- /// NM_033377 // Homo sapiens chorionic gonadotropin, beta polypeptide 1 (CGB1), mRNA. // refseq // 11 // --- /// NM_033378 // Homo sapiens chorionic gonadotropin, beta polypeptide 2 (CGB2), mRNA. // refseq // 11 // --- ---
11715112_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g83921608 g83921608 /TID=g83921608 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g83921608 /REP_ORG=Homo sapiens g83921608 --- Hs.531182 February 2009 (Genome Reference Consortium GRCh37) chr1:75033795-75139422 (-) // 93.68 // p31.1 chromosome 1 open reading frame 173 C1orf173 chr1p31.1 NM_001002912 full length ENSG00000178965 127254 C9J2V0 /// C9JMX6 /// Q5RHP9 --- --- NP_001002912 NM_001002912 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 5 transcripts. // false // Matching Probes // A CR749349(11),ENST00000326665(11),ENST00000342217(11),ENST00000433746(11),NM_001002912(11) CR749349 // Homo sapiens mRNA; cDNA DKFZp781L0319 (from clone DKFZp781L0319). // gb_htc // 11 // --- /// ENST00000326665 // cdna:known chromosome:GRCh37:1:75033798:75139422:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// ENST00000342217 // cdna:known chromosome:GRCh37:1:75033798:75132528:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// ENST00000433746 // cdna:known chromosome:GRCh37:1:75033798:75100360:-1 gene:ENSG00000178965 // ensembl // 11 // --- /// NM_001002912 // Homo sapiens chromosome 1 open reading frame 173 (C1orf173), mRNA. // refseq // 11 // --- ---
11715113_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g153251793 g153251793 /TID=g153251793 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g153251793 /REP_ORG=Homo sapiens g153251793 --- Hs.567527 February 2009 (Genome Reference Consortium GRCh37) chr11:71498556-71512280 (+) // 95.31 // q13.4 /// chr11:3429472-3443752 (-) // 89.14 // p15.4 family with sequence similarity 86, member C FAM86C chr11q13.4 NM_001099653, NM_018172, NM_152563 full length ENSG00000158483 55199 B2RD94 /// B4DDJ9 /// Q05BU3 /// Q9NVL1 --- --- NP_001093123 /// NP_060642 /// NP_689776 NM_001099653 /// NM_018172 /// NM_152563 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 7 transcripts. // false // Matching Probes // A BC032519(11),ENST00000346333(10),ENST00000359244(10),ENST00000426628(10),NM_001099653(11),NM_018172(11),NM_152563(11) BC032519 // Homo sapiens family with sequence similarity 86, member C, mRNA (cDNA clone MGC:45068 IMAGE:5494088), complete cds. // gb // 11 // --- /// ENST00000346333 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000359244 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000426628 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// NM_001099653 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_018172 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152563 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 2, mRNA. // refseq // 11 // --- ENST00000340537 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000448228 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000313946 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000304751 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000431227 // ensembl // 1 // Cross Hyb Matching Probes /// BC085016 // gb // 8 // Cross Hyb Matching Probes /// BC098427 // gb // 5 // Cross Hyb Matching Probes /// AK127422 // gb // 1 // Cross Hyb Matching Probes /// BC040317 // gb // 1 // Cross Hyb Matching Probes /// BC062615 // gb // 8 // Cross Hyb Matching Probes /// BC068011 // gb // 6 // Cross Hyb Matching Probes /// AK026807 // gb // 6 // Cross Hyb Matching Probes /// BC007983 // gb_htc // 8 // Cross Hyb Matching Probes /// BC048297 // gb_htc // 8 // Cross Hyb Matching Probes /// BC065013 // gb_htc // 8 // Cross Hyb Matching Probes /// BC072459 // gb_htc // 8 // Cross Hyb Matching Probes /// NR_024252 // refseq // 1 // Cross Hyb Matching Probes /// NR_024254 // refseq // 8 // Cross Hyb Matching Probes /// NR_024241 // refseq // 6 // Cross Hyb Matching Probes /// NM_001083537 // refseq // 8 // Cross Hyb Matching Probes /// NR_003494 // refseq // 8 // Cross Hyb Matching Probes
11715114_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g153251810 g153251810 /TID=g153251810 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g153251810 /REP_ORG=Homo sapiens g153251810 --- Hs.567527 February 2009 (Genome Reference Consortium GRCh37) chr11:71498556-71512280 (+) // 95.49 // q13.4 /// chr11:3429472-3443752 (-) // 89.41 // p15.4 family with sequence similarity 86, member C FAM86C chr11q13.4 NM_001099653, NM_018172, NM_152563 full length ENSG00000158483 55199 B2RD94 /// B4DDJ9 /// Q05BU3 /// Q9NVL1 --- --- NP_001093123 /// NP_060642 /// NP_689776 NM_001099653 /// NM_018172 /// NM_152563 --- --- --- --- --- --- --- --- --- --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 7 transcripts. // false // Matching Probes // A BC032519(11),ENST00000346333(10),ENST00000359244(10),ENST00000426628(10),NM_001099653(11),NM_018172(11),NM_152563(11) BC032519 // Homo sapiens family with sequence similarity 86, member C, mRNA (cDNA clone MGC:45068 IMAGE:5494088), complete cds. // gb // 11 // --- /// ENST00000346333 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000359244 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// ENST00000426628 // cdna:known chromosome:GRCh37:11:71498557:71512273:1 gene:ENSG00000158483 // ensembl // 10 // --- /// NM_001099653 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 3, mRNA. // refseq // 11 // --- /// NM_018172 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 1, mRNA. // refseq // 11 // --- /// NM_152563 // Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 2, mRNA. // refseq // 11 // --- ENST00000340537 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000448228 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000313946 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000304751 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000431227 // ensembl // 1 // Cross Hyb Matching Probes /// BC085016 // gb // 8 // Cross Hyb Matching Probes /// BC098427 // gb // 5 // Cross Hyb Matching Probes /// AK127422 // gb // 1 // Cross Hyb Matching Probes /// BC040317 // gb // 1 // Cross Hyb Matching Probes /// BC062615 // gb // 8 // Cross Hyb Matching Probes /// BC068011 // gb // 6 // Cross Hyb Matching Probes /// AK026807 // gb // 6 // Cross Hyb Matching Probes /// BC007983 // gb_htc // 8 // Cross Hyb Matching Probes /// BC048297 // gb_htc // 8 // Cross Hyb Matching Probes /// BC065013 // gb_htc // 8 // Cross Hyb Matching Probes /// BC072459 // gb_htc // 8 // Cross Hyb Matching Probes /// NR_024252 // refseq // 1 // Cross Hyb Matching Probes /// NR_024254 // refseq // 8 // Cross Hyb Matching Probes /// NR_024241 // refseq // 6 // Cross Hyb Matching Probes /// NM_001083537 // refseq // 8 // Cross Hyb Matching Probes /// NR_003494 // refseq // 8 // Cross Hyb Matching Probes
11715115_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21166387 g21166387 /TID=g21166387 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21166387 /REP_ORG=Homo sapiens g21166387 --- Hs.553506 February 2009 (Genome Reference Consortium GRCh37) chr6:26273203-26273640 (+) // 100.0 // p22.2 histone cluster 1, H2bi HIST1H2BI chr6p21.3 NM_003525 full length --- 8346 B2R4S9 /// P62807 --- 602807 NP_003516 NM_003525 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation 0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A NM_003525(11) NM_003525 // Homo sapiens histone cluster 1, H2bi (HIST1H2BI), mRNA. // refseq // 11 // --- ENST00000377733 // ensembl // 4 // Cross Hyb Matching Probes /// BC101653 // gb // 4 // Cross Hyb Matching Probes /// BC101655 // gb // 4 // Cross Hyb Matching Probes
11715116_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21264600 g21264600 /TID=g21264600 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21264600 /REP_ORG=Homo sapiens g21264600 --- Hs.662174 February 2009 (Genome Reference Consortium GRCh37) chr6:26204872-26205249 (+) // 100.0 // p22.2 histone cluster 1, H4e HIST1H4E chr6p21.3 NM_003545 full length ENSG00000198518 8367 B2R4R0 /// P62805 /// Q0VAS5 /// Q6B823 --- 602830 NP_003536 NM_003545 --- --- --- --- --- --- 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphoinositide-mediated signaling // non-traceable author statement 0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction --- IPR004823 // TATA box binding protein associated factor (TAF) // 1.8E-4 --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A NM_003545(11) ENST00000360441 // cdna:known chromosome:GRCh37:6:26204858:26206266:1 gene:ENSG00000198518 // ensembl // 11 // --- /// NM_003545 // Homo sapiens histone cluster 1, H4e (HIST1H4E), mRNA. // refseq // 11 // --- GENSCAN00000044918 // ensembl // 6 // Cross Hyb Matching Probes /// CR542180 // gb // 6 // Cross Hyb Matching Probes /// CR542189 // gb // 6 // Cross Hyb Matching Probes /// AK312153 // gb_htc // 6 // Cross Hyb Matching Probes
11715117_x_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g15718715 g15718715 /TID=g15718715 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g15718715 /REP_ORG=Homo sapiens g15718715 --- Hs.406691 February 2009 (Genome Reference Consortium GRCh37) chr6:27782079-27782518 (-) // 100.0 // p22.1 histone cluster 1, H2aj HIST1H2AJ chr6p22-p21.3 NM_021066 full length ENSG00000182611 8331 Q99878 --- 602791 NP_066544 NM_021066 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement 0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A NM_021066(11) ENST00000333151 // cdna:known chromosome:GRCh37:6:27782080:27782518:-1 gene:ENSG00000182611 // ensembl // 11 // --- /// NM_021066 // Homo sapiens histone cluster 1, H2aj (HIST1H2AJ), mRNA. // refseq // 11 // --- GENSCAN00000021378 // ensembl // 1 // Cross Hyb Matching Probes /// GENSCAN00000044397 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000358739 // ensembl // 1 // Cross Hyb Matching Probes /// BC112254 // gb // 1 // Cross Hyb Matching Probes /// BC112256 // gb // 1 // Cross Hyb Matching Probes /// BC133048 // gb // 5 // Cross Hyb Matching Probes /// BC133050 // gb // 5 // Cross Hyb Matching Probes /// NM_003509 // refseq // 1 // Cross Hyb Matching Probes
11715118_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g21396482 g21396482 /TID=g21396482 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g21396482 /REP_ORG=Homo sapiens g21396482 --- Hs.182137 February 2009 (Genome Reference Consortium GRCh37) chr6:26199786-26200216 (+) // 100.0 // p22.2 histone cluster 1, H2bf HIST1H2BF chr6p21.3 NM_003522 full length ENSG00000197846 8343 B2R4S9 /// P62807 /// Q0D2M2 --- 602804 NP_003513 NM_003522 --- --- --- --- --- --- 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation 0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction --- --- --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 4 transcripts. // false // Matching Probes // A BC056264(11),BC096120(11),BC096123(11),NM_003522(11) BC056264 // Homo sapiens histone 1, H2bg, mRNA (cDNA clone IMAGE:6668499), partial cds. // gb // 11 // --- /// BC096120 // Homo sapiens histone cluster 1, H2bf, mRNA (cDNA clone MGC:116766 IMAGE:40002352), complete cds. // gb // 11 // --- /// BC096123 // Homo sapiens histone cluster 1, H2bf, mRNA (cDNA clone MGC:116769 IMAGE:40002357), complete cds. // gb // 11 // --- /// ENST00000359985 // cdna:known chromosome:GRCh37:6:26199748:26200942:1 gene:ENSG00000197846 // ensembl // 11 // --- /// NM_003522 // Homo sapiens histone cluster 1, H2bf (HIST1H2BF), mRNA. // refseq // 11 // --- GENSCAN00000044913 // ensembl // 3 // Cross Hyb Matching Probes
11715119_s_at Human Genome HG-U219 Array Homo sapiens 20-Aug-10 Consensus sequence Affymetrix Proprietary Database g157278360 g157278360 /TID=g157278360 /CNT=1 /FEA=FLmRNA /TIER=FL /STK=0 /DEF=g157278360 /REP_ORG=Homo sapiens g157278360 --- Hs.144372 February 2009 (Genome Reference Consortium GRCh37) chr15:62455736-62457482 (-) // 90.1 // q22.2 C2 calcium-dependent domain containing 4B C2CD4B chr15q22.2 NM_001007595 full length ENSG00000205502 388125 A6NLJ0 --- 610344 NP_001007596 NM_001007595 --- --- --- --- --- --- --- 0005634 // nucleus // inferred from electronic annotation --- --- IPR000008 // C2 // 0.12 --- --- This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 2 transcripts. // false // Matching Probes // A ENST00000380392(11),NM_001007595(11) ENST00000380392 // cdna:known chromosome:GRCh37:15:62455737:62457482:-1 gene:ENSG00000205502 // ensembl // 11 // --- /// NM_001007595 // Homo sapiens C2 calcium-dependent domain containing 4B (C2CD4B), mRNA. // refseq // 11 // --- GENSCAN00000044022 // ensembl // 2 // Cross Hyb Matching Probes

Total number of rows: 49386

Table truncated, full table size 157123 Kbytes.




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